RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PIBF1Q8WXW3 757 aa19.92■□□□□ 0.78
PVT1-220ENST00000524165 PARD6AQ9NPB6 346 aa19.92■□□□□ 0.78
PVT1-220ENST00000524165 MTCL1Q9Y4B5 1905 aaKnown RBP19.92■□□□□ 0.78
PVT1-220ENST00000524165 CCDC195A0A1B0GUA6 201 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 KANSL1LA0AUZ9 987 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 ANHXE9PGG2 379 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 C22orf31O95567 290 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 CNPP09543 421 aaKnown RBP19.91■□□□□ 0.78
PVT1-220ENST00000524165 MAGEA9P43362 315 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 COL9A3Q14050 684 aaPredicted RBP19.91■□□□□ 0.78
PVT1-220ENST00000524165 FAM160B1Q5W0V3 765 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 CYB5R4Q7L1T6 521 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 ZNF710Q8N1W2 664 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 BCL7CQ8WUZ0 217 aaPredicted RBP19.91■□□□□ 0.78
PVT1-220ENST00000524165 RRP36Q96EU6 259 aaKnown RBP19.91■□□□□ 0.78
PVT1-220ENST00000524165 DDX23Q9BUQ8 820 aaKnown RBP19.91■□□□□ 0.78
PVT1-220ENST00000524165 DSCC1Q9BVC3 393 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 OSBPL6Q9BZF3 934 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 PSTPIP2Q9H939 334 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 SH2B1Q9NRF2 756 aaPredicted RBP19.91■□□□□ 0.78
PVT1-220ENST00000524165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.91■□□□□ 0.786e-7■■■■□ 24.2
PVT1-220ENST00000524165 DPP7Q9UHL4 492 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 GMEB2Q9UKD1 530 aa19.91■□□□□ 0.78
PVT1-220ENST00000524165 GALTP07902 379 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 LAMP2P13473 410 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 EIF4BP23588 611 aaKnown RBP19.9■□□□□ 0.78
PVT1-220ENST00000524165 HTR4Q13639 388 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 ELMSAN1Q6PJG2 1045 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 MXRA8Q9BRK3 442 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 VN1R3Q9BXE9 311 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 SPZ1Q9BXG8 430 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 MAN1C1Q9NR34 630 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 DACT1Q9NYF0 836 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 ZBTB47Q9UFB7 747 aaPredicted RBP19.9■□□□□ 0.78
PVT1-220ENST00000524165 ANGPTL2Q9UKU9 493 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 CEP295Q9C0D2 2601 aa19.9■□□□□ 0.78
PVT1-220ENST00000524165 SPDYE3A6NKU9 549 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 BACH1O14867 736 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 LILRB3O75022 631 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 PAPLNO95428 1278 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 SDSP20132 328 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 ABHD15Q6UXT9 468 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 METTL13Q8N6R0 699 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 ADAMTS10Q9H324 1103 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 NRDE2Q9H7Z3 1164 aa19.89■□□□□ 0.77
PVT1-220ENST00000524165 SEC63Q9UGP8 760 aaKnown RBP19.89■□□□□ 0.77
PVT1-220ENST00000524165 RALGAPA1Q6GYQ0 2036 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 INPPL1O15357 1258 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 NLRP11P59045 1033 aaKnown RBP19.88■□□□□ 0.77
PVT1-220ENST00000524165 ITGB3BPQ13352 177 aaPredicted RBP19.88■□□□□ 0.77
PVT1-220ENST00000524165 PDXDC2PQ6P474 469 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 MRPL17Q9NRX2 175 aaKnown RBP19.88■□□□□ 0.77
PVT1-220ENST00000524165 PCDHA6Q9UN73 950 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 PCDHA8Q9Y5H6 950 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 NUMBLQ9Y6R0 609 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 ZFYVE26Q68DK2 2539 aa19.88■□□□□ 0.77
PVT1-220ENST00000524165 ASPMQ8IZT6 3477 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 SMARCA1P28370 1054 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 PRKCQQ04759 706 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 CCDC60Q8IWA6 550 aaPredicted RBP19.87■□□□□ 0.77
PVT1-220ENST00000524165 BBXQ8WY36 941 aaPredicted RBP19.87■□□□□ 0.77
PVT1-220ENST00000524165 SMG7Q92540 1137 aaKnown RBP19.87■□□□□ 0.77
PVT1-220ENST00000524165 RILPL2Q969X0 211 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 FAM126AQ9BYI3 521 aaPredicted RBP19.87■□□□□ 0.77
PVT1-220ENST00000524165 ZNF302Q9NR11 478 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 TBC1D13Q9NVG8 400 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 FRYQ5TBA9 3013 aa19.87■□□□□ 0.77
PVT1-220ENST00000524165 ERICH2A1L162 156 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 IFIT3O14879 490 aaKnown RBP19.86■□□□□ 0.77
PVT1-220ENST00000524165 LRP3O75074 770 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 ATP4AP20648 1035 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 SHC2P98077 582 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 RSPO2Q6UXX9 243 aaPredicted RBP19.86■□□□□ 0.77
PVT1-220ENST00000524165 DDX1Q92499 740 aaKnown RBP19.86■□□□□ 0.77
PVT1-220ENST00000524165 MAP7D2Q96T17 732 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 TRAIPQ9BWF2 469 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 SENP2Q9HC62 589 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 AGO4Q9HCK5 861 aaKnown RBP19.86■□□□□ 0.77
PVT1-220ENST00000524165 PCDHB15Q9Y5E8 787 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.86■□□□□ 0.77
PVT1-220ENST00000524165 ZFP37Q9Y6Q3 630 aaPredicted RBP19.86■□□□□ 0.77
PVT1-220ENST00000524165 WDR81Q562E7 1941 aa19.86■□□□□ 0.77
PVT1-220ENST00000524165 MAGEB2O15479 319 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 CCNE2O96020 404 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 SSBP05455 408 aaKnown RBP eCLIP19.85■□□□□ 0.77
PVT1-220ENST00000524165 ADH1AP07327 375 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 PMLP29590 882 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 SLC11A1P49279 550 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 GPC5P78333 572 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 RNASELQ05823 741 aaKnown RBP19.85■□□□□ 0.77
PVT1-220ENST00000524165 SPEM2Q0P670 501 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 SNW1Q13573 536 aaKnown RBP19.85■□□□□ 0.77
PVT1-220ENST00000524165 UBXN2BQ14CS0 331 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 UBE2SQ16763 222 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 NOMO2Q5JPE7 1267 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 ANKRD45Q5TZF3 282 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 GLB1LQ6UWU2 654 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 CATIPQ7Z7H3 387 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 HDAC7Q8WUI4 952 aa19.85■□□□□ 0.77
PVT1-220ENST00000524165 ZNF707Q96C28 371 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms