RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 NAP1L4Q99733 375 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 JPH2Q9BR39 696 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 INO80BQ9C086 356 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
CTNNA1-237ENST00000523275 A0A087WZ62 844 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 FSCN2O14926 492 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 TBX3O15119 743 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 MARCH6O60337 910 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 CCNT1O60563 726 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 GLP2RO95838 553 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 SFPQP23246 707 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 PPM1AP35813 382 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 PLA2G5P39877 138 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 CLLU1OSQ5K130 101 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 ZNF598Q86UK7 904 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 SMRP1Q8NCR6 262 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 WASF1Q92558 559 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 FDXACB1Q9BRP7 624 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 NGRNQ9NPE2 291 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 GJB4Q9NTQ9 266 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 SPG21Q9NZD8 308 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-237ENST00000523275 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 DTNBO60941 627 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 CTDNEP1O95476 244 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 P4HBP07237 508 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 AK2P54819 239 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 NPEPPSP55786 919 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 DUSP6Q16828 381 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 KSR1Q8IVT5 923 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 HELQQ8TDG4 1101 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 HAS1Q92839 578 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 TRAIPQ9BWF2 469 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-237ENST00000523275 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 SRGAP2BP0DMP2 458 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 SKIP12755 728 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 PBX3P40426 434 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 ALDH7A1P49419 539 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 EPHA7Q15375 998 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 PLPP4Q5VZY2 271 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 TMEM184AQ6ZMB5 413 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 CATSPER4Q7RTX7 472 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 RNF135Q8IUD6 432 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 NLRP4Q96MN2 994 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 MRPL9Q9BYD2 267 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 PIN4Q9Y237 131 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 PPME1Q9Y570 386 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
CTNNA1-237ENST00000523275 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 ZNF623O75123 536 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 KRT2P35908 639 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 RFC5P40937 340 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 EARS2Q5JPH6 523 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 C4orf19Q8IY42 314 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 SLFN12Q8IYM2 578 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 SLC39A11Q8N1S5 342 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 RSPH1Q8WYR4 309 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 DHX33Q9H6R0 707 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 IFT122Q9HBG6 1241 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 WRAP73Q9P2S5 460 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms