RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LAMP2P13473 410 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 ZSCAN20P17040 1043 aaPredicted RBP15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 SLC26A2P50443 739 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 SHC2P98077 582 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 SPEM2Q0P670 501 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 CYP26C1Q6V0L0 522 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 EMILIN2Q9BXX0 1053 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 MAN1C1Q9NR34 630 aa15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 MTF2Q9Y483 593 aaPredicted RBP15.85■□□□□ 0.13
NKX3-1-202ENST00000523261 A0A0U1RQF3 1178 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 CCDC195A0A1B0GUA6 201 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 LILRB3O75022 631 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 ATG7O95352 703 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 TICAM2Q86XR7 235 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 OSBPL6Q9BZF3 934 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 KRT23Q9C075 422 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 NUMBLQ9Y6R0 609 aa15.84■□□□□ 0.13
NKX3-1-202ENST00000523261 IGKV6D-21A0A0A0MT36 114 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 CARNS1A5YM72 827 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 C22orf31O95567 290 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 PROS1P07225 676 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 GALTP07902 379 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 MAGEA9P43362 315 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 GPC5P78333 572 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 SNW1Q13573 536 aaKnown RBP15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 ZNF484Q5JVG2 852 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 TSSK4Q6SA08 328 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 ST13P5Q8NFI4 369 aaPredicted RBP15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 BBXQ8WY36 941 aaPredicted RBP15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 NRDE2Q9H7Z3 1164 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 KCNH7Q9NS40 1196 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 MYH15Q9Y2K3 1946 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 NFASCO94856 1347 aa15.83■□□□□ 0.12
NKX3-1-202ENST00000523261 IGF2RP11717 2491 aa15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 INPPL1O15357 1258 aa15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 RFPL2O75678 378 aa15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 PAPLNO95428 1278 aa15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 UBXN2BQ14CS0 331 aa15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 SMG7Q92540 1137 aaKnown RBP15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 ZNF707Q96C28 371 aaPredicted RBP15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 RPP25Q9BUL9 199 aaKnown RBP15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.82■□□□□ 0.12
NKX3-1-202ENST00000523261 FAM170BA6NMN3 283 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 LRP3O75074 770 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 SSBP05455 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 KCNA4P22459 653 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 EIF4BP23588 611 aaKnown RBP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 SLC11A1P49279 550 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 MFAP1P55081 439 aaKnown RBP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 NLRP11P59045 1033 aaKnown RBP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 PRKCQQ04759 706 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 MLF2Q15773 248 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 N4BP2L1Q5TBK1 243 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 LAIR1Q6GTX8 287 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 CYB5R4Q7L1T6 521 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 SDF4Q9BRK5 362 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 ADAMTS10Q9H324 1103 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 LTB4R2Q9NPC1 389 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 PRMT8Q9NR22 394 aaPredicted RBP15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 TBC1D13Q9NVG8 400 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 DNAJB4Q9UDY4 337 aa15.81■□□□□ 0.12
NKX3-1-202ENST00000523261 B4GALT3O60512 393 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 TROAPQ12815 778 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 ITGB3BPQ13352 177 aaPredicted RBP15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 LPAL2Q16609 132 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 CCDC60Q8IWA6 550 aaPredicted RBP15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 METTL13Q8N6R0 699 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 RSPH1Q8WYR4 309 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 DDX1Q92499 740 aaKnown RBP15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 FGF14Q92915 247 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 CLDN23Q96B33 292 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 FAM126AQ9BYI3 521 aaPredicted RBP15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 RAB23Q9ULC3 237 aa15.8■□□□□ 0.12
NKX3-1-202ENST00000523261 BACH1O14867 736 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 GDF9O60383 454 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 CCNE2O96020 404 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 RETP07949 1114 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 MYBP10242 640 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 ATP4AP20648 1035 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 CD72P21854 359 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 CLCN3P51790 818 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 SLC44A4Q53GD3 710 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 FAM160B1Q5W0V3 765 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 ABHD15Q6UXT9 468 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 RSPO2Q6UXX9 243 aaPredicted RBP15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 PRR23CQ6ZRP0 262 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 MXRA8Q9BRK3 442 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 SENP2Q9HC62 589 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 MRPL17Q9NRX2 175 aaKnown RBP15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 SEMA4GQ9NTN9 838 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 STK39Q9UEW8 545 aa15.79■□□□□ 0.12
NKX3-1-202ENST00000523261 TDGF1P13385 188 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 PDE1AP54750 535 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 UBE2SQ16763 222 aa15.78■□□□□ 0.12
NKX3-1-202ENST00000523261 IMMTQ16891 758 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms