RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 LTB4R2Q9NPC1 389 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 LHX6Q9UPM6 363 aa12.64□□□□□ -0.39
CTNNA1-234ENST00000522227 SPINK2P20155 84 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 AK2P54819 239 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 MTMR1Q13613 665 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 ZBTB41Q5SVQ8 909 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 IFIT1BQ5T764 474 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 PARM1Q6UWI2 310 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 LPPQ93052 612 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 JPH1Q9HDC5 661 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 SLC9A2Q9UBY0 812 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 DNAJB4Q9UDY4 337 aa12.63□□□□□ -0.39
CTNNA1-234ENST00000522227 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 EVPLQ92817 2033 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 DOCK8Q8NF50 2099 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 ANHXE9PGG2 379 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 ZNF213O14771 459 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 GALTP07902 379 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 RETP07949 1114 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 PCP11498 1178 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 SLC11A1P49279 550 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 ACTR2P61160 394 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 RNASELQ05823 741 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 RING1Q06587 406 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 TRAF1Q13077 416 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 AASDHQ4L235 1098 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 LRSAM1Q6UWE0 723 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 DDX1Q92499 740 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 NELL1Q92832 810 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 FGF14Q92915 247 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 CDHR1Q96JP9 859 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 UBAC1Q9BSL1 405 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 CNOT1A5YKK6 2376 aaKnown RBP12.62□□□□□ -0.39
CTNNA1-234ENST00000522227 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 BACH1O14867 736 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 GPR32O75388 356 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 CLCN3P51790 818 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 MTAPQ13126 283 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 NMIQ13287 307 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 CCDC6Q16204 474 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 CSRP2Q16527 193 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 TPRG1Q6ZUI0 275 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 PLPPR4Q7Z2D5 763 aa12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 CMASQ8NFW8 434 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 ZNF707Q96C28 371 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 MRPL17Q9NRX2 175 aaKnown RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-234ENST00000522227 SETXQ7Z333 2677 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 PALM3A6NDB9 673 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 CYTH3O43739 400 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 HBP1O60381 514 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 CSDE1O75534 798 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 MS4A1P11836 297 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 NLRP11P59045 1033 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 SIM2Q14190 667 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 SF3A2Q15428 464 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 ZNF598Q86UK7 904 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 GLYCTKQ8IVS8 523 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 PHKBQ93100 1093 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 SCLT1Q96NL6 688 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 DDX23Q9BUQ8 820 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 RIOX1Q9H6W3 641 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 NDRG2Q9UN36 371 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 UBIAD1Q9Y5Z9 338 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 RALGAPA1Q6GYQ0 2036 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 MYH15Q9Y2K3 1946 aa12.6□□□□□ -0.39
CTNNA1-234ENST00000522227 A0A0U1RQF3 1178 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 MEIS2O14770 477 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 B4GALT3O60512 393 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 GLUD1P00367 558 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 MX1P20591 662 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 NTHL1P78549 312 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 PRKCQQ04759 706 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 FOXC1Q12948 553 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 UBE2SQ16763 222 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 CKAP2LQ8IYA6 745 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 KXD1Q9BQD3 176 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 OSBPL6Q9BZF3 934 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 TBC1D13Q9NVG8 400 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 ZMYM6O95789 1325 aa12.59□□□□□ -0.39
CTNNA1-234ENST00000522227 MEIS3P2A8K0S8 358 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms