RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 ZSWIM4Q9H7M6 989 aa29.02■■■□□ 2.24
LAPTM4B-203ENST00000521545 ATG2AQ2TAZ0 1938 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 SSTR3P32745 418 aaPredicted RBP29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 GTF2F1P35269 517 aaKnown RBP eCLIP29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 IRS1P35568 1242 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 DYDC2Q96IM9 177 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 NLRP4Q96MN2 994 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 RGL1Q9NZL6 768 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 HCSTQ9UBK5 93 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 PCDHA12Q9UN75 941 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 LIMCH1Q9UPQ0 1083 aa29.01■■■□□ 2.23
LAPTM4B-203ENST00000521545 YWHABP31946 246 aaKnown RBP29■■■□□ 2.23
LAPTM4B-203ENST00000521545 RFC5P40937 340 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 ADAM15Q13444 863 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 CALCRLQ16602 461 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 KSR1Q8IVT5 923 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 GJD3Q8N144 294 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 LRRC43Q8N309 656 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 TLR9Q9NR96 1032 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 RNF19AQ9NV58 838 aa29■■■□□ 2.23
LAPTM4B-203ENST00000521545 WRAP73Q9P2S5 460 aaPredicted RBP29■■■□□ 2.23
LAPTM4B-203ENST00000521545 PUF60Q9UHX1 559 aaKnown RBP29■■■□□ 2.23
LAPTM4B-203ENST00000521545 NDUFV1P49821 464 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 SAFBQ15424 915 aaKnown RBP eCLIP28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 TWF2Q6IBS0 349 aaKnown RBP28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 CATSPER4Q7RTX7 472 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 ADGRD2Q7Z7M1 963 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 TPH2Q8IWU9 490 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 ZNF579Q8NAF0 562 aaKnown RBP28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 DHX33Q9H6R0 707 aaKnown RBP28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 TLE6Q9H808 572 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 CD320Q9NPF0 282 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 PIN4Q9Y237 131 aaKnown RBP28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 COL4A3BPQ9Y5P4 624 aa28.99■■■□□ 2.23
LAPTM4B-203ENST00000521545 LINC01565O15544 149 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 SKIP12755 728 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 NRIP1P48552 1158 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 CYP4A11Q02928 519 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 DLX2Q07687 328 aaPredicted RBP28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 SPIRE1Q08AE8 756 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 CTTNQ14247 550 aaKnown RBP28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 CLUL1Q15846 466 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 XKR9Q5GH70 373 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 PDE12Q6L8Q7 609 aaKnown RBP28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 LRRC55Q6ZSA7 311 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 RBM23Q86U06 439 aaKnown RBP28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 EFHBQ8N7U6 833 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 TCP11Q8WWU5 503 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 PSPC1Q8WXF1 523 aaKnown RBP28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 ZNF558Q96NG5 402 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 EPHX3Q9H6B9 360 aa28.98■■■□□ 2.23
LAPTM4B-203ENST00000521545 GAS2O43903 313 aaKnown RBP28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 NEMFO60524 1076 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 CLLU1OSQ5K130 101 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 KCNT2Q6UVM3 1135 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 ZNF598Q86UK7 904 aaKnown RBP28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 HELQQ8TDG4 1101 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 PRPF31Q8WWY3 499 aaKnown RBP28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 TMEM143Q96AN5 459 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 PRKAG3Q9UGI9 489 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 CD207Q9UJ71 328 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 LZTS1Q9Y250 596 aa28.97■■■□□ 2.23
LAPTM4B-203ENST00000521545 PLXNA4Q9HCM2 1894 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 TBX10O75333 385 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 SRGAP2CP0DJJ0 459 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 COL9A1P20849 921 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 PPM1AP35813 382 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 PHKA2P46019 1235 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 PLCB3Q01970 1234 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 KRT17Q04695 432 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 MRPS27Q92552 414 aaKnown RBP28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 EIF2AK1Q9BQI3 630 aaKnown RBP28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 TRAIPQ9BWF2 469 aa28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 MRPL9Q9BYD2 267 aaKnown RBP28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 TTC12Q9H892 705 aaPredicted RBP28.96■■■□□ 2.23
LAPTM4B-203ENST00000521545 ASAP2O43150 1006 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 SLITRK3O94933 977 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 TXKP42681 527 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 EMC2Q15006 297 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 CCDC83Q8IWF9 413 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 RSPH1Q8WYR4 309 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 IFT122Q9HBG6 1241 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 BMP2KQ9NSY1 1161 aaPredicted RBP28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 SPG21Q9NZD8 308 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 PCDHGC5Q9Y5F6 944 aa28.95■■■□□ 2.22
LAPTM4B-203ENST00000521545 FSD2A1L4K1 749 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 MBTPS2O43462 519 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 ATF7P17544 494 aaPredicted RBP28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 RAB27AP51159 221 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 ERVFC1P60507 584 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 LAMTOR4Q0VGL1 99 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 ST3GAL1Q11201 340 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 SMAD4Q13485 552 aaKnown RBP28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 SMAD2Q15796 467 aaKnown RBP28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 SRGAP1Q7Z6B7 1085 aa28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 ZSCAN31Q96LW9 406 aaPredicted RBP28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 LLPHQ9BRT6 129 aaKnown RBP28.94■■■□□ 2.22
LAPTM4B-203ENST00000521545 ZBTB39O15060 712 aa28.93■■■□□ 2.22
LAPTM4B-203ENST00000521545 ATP2B1P20020 1258 aa28.93■■■□□ 2.22
LAPTM4B-203ENST00000521545 GUCY1B3Q02153 619 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms