RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 VPS13AQ96RL7 3174 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 CCDC196A0A1B0GTZ2 297 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 CARNS1A5YM72 827 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 ADAMTS3O15072 1205 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 ZNF862O60290 1169 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 ASGR2P07307 311 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 GNA11P29992 359 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 CIITAP33076 1130 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
CLDND1-217ENST00000508071 FGD1P98174 961 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 TBC1D8BQ0IIM8 1120 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 ASTLQ6HA08 431 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-217ENST00000508071 KIAA1841Q6NSI8 718 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 PLCD3Q8N3E9 789 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 RSPH1Q8WYR4 309 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 ZBP1Q9H171 429 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 MFSD1Q9H3U5 465 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 SMOC2Q9H3U7 446 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 LIMD1Q9UGP4 676 aa20.29■□□□□ 0.84
CLDND1-217ENST00000508071 DMDP11532 3685 aa20.28■□□□□ 0.84
CLDND1-217ENST00000508071 ZC3H11AO75152 810 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLDND1-217ENST00000508071 GIT2Q14161 759 aa20.28■□□□□ 0.84
CLDND1-217ENST00000508071 KRT32Q14532 448 aa20.28■□□□□ 0.84
CLDND1-217ENST00000508071 GCOM2Q9BZD3 368 aaPredicted RBP20.28■□□□□ 0.84
CLDND1-217ENST00000508071 CHST12Q9NRB3 414 aa20.28■□□□□ 0.84
CLDND1-217ENST00000508071 USTQ9Y2C2 406 aa20.28■□□□□ 0.84
CLDND1-217ENST00000508071 CHMP2AO43633 222 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 GAS7O60861 476 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 CSDE1O75534 798 aaKnown RBP20.27■□□□□ 0.84
CLDND1-217ENST00000508071 EPCAMP16422 314 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 SFNP31947 248 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 NBL1P41271 181 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 POLGP54098 1239 aaPredicted RBP20.27■□□□□ 0.84
CLDND1-217ENST00000508071 CDC42EP1Q00587 391 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 ASCL5Q7RTU5 278 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 BICD2Q8TD16 824 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 AUTS2Q8WXX7 1259 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 LENG9Q96B70 501 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 IRAK3Q9Y616 596 aa20.27■□□□□ 0.84
CLDND1-217ENST00000508071 WDR87Q6ZQQ6 2873 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 PRR23AA6NEV1 266 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
CLDND1-217ENST00000508071 CTSAP10619 480 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 PHKA2P46019 1235 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 JAK3P52333 1124 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
CLDND1-217ENST00000508071 FOXK2Q01167 660 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 UGCGQ16739 394 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 TWF2Q6IBS0 349 aaKnown RBP20.26■□□□□ 0.83
CLDND1-217ENST00000508071 KANK3Q6NY19 840 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 DDX53Q86TM3 631 aaKnown RBP20.26■□□□□ 0.83
CLDND1-217ENST00000508071 CABP7Q86V35 215 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 IGSF21Q96ID5 467 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 RIT2Q99578 217 aa20.26■□□□□ 0.83
CLDND1-217ENST00000508071 MSH4O15457 936 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
CLDND1-217ENST00000508071 SKIP12755 728 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 SFPQP23246 707 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLDND1-217ENST00000508071 DNM2P50570 870 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 CLCN5P51795 746 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 AKAP17AQ02040 695 aaKnown RBP20.25■□□□□ 0.83
CLDND1-217ENST00000508071 GLB1LQ6UWU2 654 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 TMC5Q6UXY8 1006 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 PPFIBP1Q86W92 1011 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 TMEM173Q86WV6 379 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-217ENST00000508071 SLC22A17Q8WUG5 538 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 LPPQ93052 612 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 ACSF2Q96CM8 615 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-217ENST00000508071 CCDC136Q96JN2 1154 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 TEKT3Q9BXF9 490 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 CYP26B1Q9NR63 512 aa20.25■□□□□ 0.83
CLDND1-217ENST00000508071 SEPT9Q9UHD8 586 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-217ENST00000508071 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 SPDYE4A6NLX3 237 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 RNASELQ05823 741 aaKnown RBP20.24■□□□□ 0.83
CLDND1-217ENST00000508071 DRP2Q13474 957 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 TARBP2Q15633 366 aaKnown RBP20.24■□□□□ 0.83
CLDND1-217ENST00000508071 LONRF3Q496Y0 759 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 MTERF2Q49AM1 385 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 NOMO2Q5JPE7 1267 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 LRCH2Q5VUJ6 765 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 TRAIPQ9BWF2 469 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 INO80BQ9C086 356 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-217ENST00000508071 UNC45AQ9H3U1 944 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 NRDE2Q9H7Z3 1164 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 TBC1D13Q9NVG8 400 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 PIN4Q9Y237 131 aaKnown RBP20.24■□□□□ 0.83
CLDND1-217ENST00000508071 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
CLDND1-217ENST00000508071 A0A087WZ62 844 aa20.23■□□□□ 0.83
CLDND1-217ENST00000508071 GALTP07902 379 aa20.23■□□□□ 0.83
CLDND1-217ENST00000508071 FLCNQ8NFG4 579 aa20.23■□□□□ 0.83
CLDND1-217ENST00000508071 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
CLDND1-217ENST00000508071 SLC5A5Q92911 643 aa20.23■□□□□ 0.83
CLDND1-217ENST00000508071 NKD2Q969F2 451 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-217ENST00000508071 FDXACB1Q9BRP7 624 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-217ENST00000508071 NIFKQ9BYG3 293 aaKnown RBP20.23■□□□□ 0.83
CLDND1-217ENST00000508071 GBP3Q9H0R5 595 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms