RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TMX1Q9H3N1 280 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 TRPS1Q9UHF7 1281 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 ZNHIT2Q9UHR6 403 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 HS3ST4Q9Y661 456 aa3.45□□□□□ -1.86
HMGB1P35-201ENST00000503360 GRID2IPA4D2P6 1211 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 GSG1L2A8MUP6 293 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 ARVCFO00192 962 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 SOD2P04179 222 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 ITGB1P05556 798 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 JMJD7P0C870 316 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 IGFALSP35858 605 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 FLT3P36888 993 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 NEK4P51957 841 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 PTPAQ15257 358 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 PTPROQ16827 1216 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 RABL3Q5HYI8 236 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 Q6ZRM9 215 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 THNSL2Q86YJ6 484 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 GSPT2Q8IYD1 628 aaKnown RBP3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 SYNE4Q8N205 404 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 UBR7Q8N806 425 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 GPR150Q8NGU9 434 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 PCDH19Q8TAB3 1148 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 SH3RF2Q8TEC5 729 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 GPATCH3Q96I76 525 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 KCNJ15Q99712 375 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 SLC6A15Q9H2J7 730 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 IPPKQ9H8X2 491 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 BTBD7Q9P203 1132 aa3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 CTDP1Q9Y5B0 961 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P35-201ENST00000503360 A0A1W2PRX2 142 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 FAM83GA6ND36 823 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 FAM90A27PA6NNH2 459 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 GOLGA6L6A8MZA4 724 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 B4E1Z4 1266 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 KPNA6O60684 536 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 VIL1P09327 827 aaKnown RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 KCNA6P17658 529 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 IBSPP21815 317 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 CNGA1P29973 690 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 SOX5P35711 763 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 STAT3P40763 770 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ECE1P42892 770 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 DNM2P50570 870 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ADCY7P51828 1080 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ST5P78524 1137 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 PCBP1Q15365 356 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 GPR19Q15760 415 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 CFAP100Q494V2 611 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 CT47A1Q5JQC4 288 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 CDCA2Q69YH5 1023 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 NAIF1Q69YI7 327 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ZCCHC8Q6NZY4 707 aaKnown RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ABHD17CQ6PCB6 329 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 UBE2R2Q712K3 238 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 OTOP2Q7RTS6 562 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 KRT26Q7Z3Y9 468 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 DDX53Q86TM3 631 aaKnown RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 AHI1Q8N157 1196 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 PPM1KQ8N3J5 372 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 IGSF22Q8N9C0 903 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 WDR48Q8TAF3 677 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ZCRB1Q8TBF4 217 aaKnown RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 CHAC2Q8WUX2 184 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 LEO1Q8WVC0 666 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 NELL1Q92832 810 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 FBXW5Q969U6 566 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 OR10A5Q9H207 317 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 CAAP1Q9H8G2 361 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 SYNPO2LQ9H987 977 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 SAMD15Q9P1V8 674 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 MAPRE3Q9UPY8 281 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 COQ6Q9Y2Z9 468 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 COL4A3BPQ9Y5P4 624 aa3.43□□□□□ -1.86
HMGB1P35-201ENST00000503360 ARHGEF17Q96PE2 2063 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 CCDC66A2RUB6 948 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 M0R2C6 588 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 GSTA4O15217 222 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 PPM1GO15355 546 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 B3GALT2O43825 422 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 MPIG6BO95866 241 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 PYGMP11217 842 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 POU3F2P20265 443 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 RABGGTBP53611 331 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 AMPD3Q01432 767 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 FAM47CQ5HY64 1035 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 PIK3R6Q5UE93 754 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 GRAMD4Q6IC98 578 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 MFSD5Q6N075 450 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 LRRC55Q6ZSA7 311 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 C16orf59Q7L2K0 433 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 RNF180Q86T96 592 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 ZNF276Q8N554 614 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 OR14K1Q8NGZ2 314 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 PUS7Q96PZ0 661 aaKnown RBP3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 AMNQ9BXJ7 453 aa3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 CELF4Q9BZC1 486 aaKnown RBP3.42□□□□□ -1.86
HMGB1P35-201ENST00000503360 MTFR1LQ9H019 292 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms