RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 DCAF15Q66K64 600 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 FMNL3Q8IVF7 1028 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 GSPT2Q8IYD1 628 aaKnown RBP16.1■□□□□ 0.17
CHTOP-206ENST00000495554 SYCP3Q8IZU3 236 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 DAW1Q8N136 415 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 LARSQ9P2J5 1176 aaKnown RBP16.1■□□□□ 0.17
CHTOP-206ENST00000495554 NENFQ9UMX5 172 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 CES2O00748 559 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 HIRAP54198 1017 aaPredicted RBP16.1■□□□□ 0.17
CHTOP-206ENST00000495554 GJB7Q6PEY0 223 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 ZNF280CQ8ND82 737 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 WRNIP1Q96S55 665 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 STK33Q9BYT3 514 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 DBR1Q9UK59 544 aaKnown RBP16.1■□□□□ 0.17
CHTOP-206ENST00000495554 INTUQ9ULD6 942 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 DAAM1Q9Y4D1 1078 aa16.1■□□□□ 0.17
CHTOP-206ENST00000495554 ZBED4O75132 1171 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
CHTOP-206ENST00000495554 EIF2AK2P19525 551 aaKnown RBP16.09■□□□□ 0.17
CHTOP-206ENST00000495554 TNFRSF8P28908 595 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 ALCAMQ13740 583 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 PGM5Q15124 567 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 INPP4AQ96PE3 977 aaPredicted RBP16.09■□□□□ 0.17
CHTOP-206ENST00000495554 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 RLFQ13129 1914 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 F8VZ95 297 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 EXOC3O60645 756 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 SOX5P35711 763 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 NOP2P46087 812 aaKnown RBP16.09■□□□□ 0.17
CHTOP-206ENST00000495554 SLC7A5Q01650 507 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 MTMR1Q13613 665 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 RPS6KA1Q15418 735 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 TAF4BQ92750 862 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 SAMM50Q9Y512 469 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 PARP14Q460N5 1801 aa16.09■□□□□ 0.17
CHTOP-206ENST00000495554 ZC3H4Q9UPT8 1303 aaKnown RBP16.09■□□□□ 0.17
CHTOP-206ENST00000495554 DOCK1Q14185 1865 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 A0A0A6YYK5 440 aaPredicted RBP16.08■□□□□ 0.17
CHTOP-206ENST00000495554 K7ENM7 598 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 ATP9AO75110 1047 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 SYF2O95926 243 aaKnown RBP16.08■□□□□ 0.17
CHTOP-206ENST00000495554 H2AFZP0C0S5 128 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.17
CHTOP-206ENST00000495554 EPHB4P54760 987 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 BFSP1Q12934 665 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 CBWD6Q4V339 395 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 CBWD3Q5JTY5 395 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 CBWD5Q5RIA9 395 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 H2AFVQ71UI9 128 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 LMBR1Q8WVP7 490 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 KLRG1Q96E93 195 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 HINFPQ9BQA5 517 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 TBC1D22BQ9NU19 505 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 ADAMTS5Q9UNA0 930 aa16.08■□□□□ 0.17
CHTOP-206ENST00000495554 PACSIN2Q9UNF0 486 aaPredicted RBP16.08■□□□□ 0.17
CHTOP-206ENST00000495554 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.164e-10■□□□□ 9.1
CHTOP-206ENST00000495554 EVI5O60447 810 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 PHACTR2O75167 634 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 LYPLA2O95372 231 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 RARRES1P49788 294 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 DNA2P51530 1060 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
CHTOP-206ENST00000495554 EMBQ6PCB8 327 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 RNF207Q6ZRF8 634 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 LRRC57Q8N9N7 239 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 TMEM174Q8WUU8 243 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 GPRC5DQ9NZD1 345 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
CHTOP-206ENST00000495554 FDX1P10109 184 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 LMAN1P49257 510 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 HMGCS2P54868 508 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 DRAP1Q14919 205 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-206ENST00000495554 APOBEC3FQ8IUX4 373 aaKnown RBP16.07■□□□□ 0.16
CHTOP-206ENST00000495554 C12orf42Q96LP6 360 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 RMDN3Q96TC7 470 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 APEX2Q9UBZ4 518 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 LOXHD1Q8IVV2 1947 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 RNF40O75150 1001 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 KIF4AO95239 1232 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 TRIM49P0CI25 452 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 TRIM49CP0CI26 452 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 LMNB1P20700 586 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 MYL7Q01449 175 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-206ENST00000495554 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 SND1Q7KZF4 910 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHTOP-206ENST00000495554 IFT20Q8IY31 132 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 PBKQ96KB5 322 aa16.07■□□□□ 0.16
CHTOP-206ENST00000495554 INTS2Q9H0H0 1204 aaKnown RBP16.07■□□□□ 0.16
CHTOP-206ENST00000495554 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms