RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 BRMS1Q9HCU9 246 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 CYP26B1Q9NR63 512 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 TMEM161AQ9NX61 479 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
MSH5-218ENST00000494646 A0A087WWV3 80 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 WNT7AO00755 349 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 PER2O15055 1255 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 DKC1O60832 514 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSH5-218ENST00000494646 EIF5BO60841 1220 aaKnown RBP10.75□□□□□ -0.69
MSH5-218ENST00000494646 SLITRK3O94933 977 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 MMP1P03956 469 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 SRGAP2CP0DJJ0 459 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 GCFC2P16383 781 aaKnown RBP10.75□□□□□ -0.69
MSH5-218ENST00000494646 ERVFC1P60507 584 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 CYP4A11Q02928 519 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 ST3GAL1Q11201 340 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 TRIM29Q14134 588 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 ECHDC2Q86YB7 292 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 CCDC83Q8IWF9 413 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 TPH2Q8IWU9 490 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 FAM178BQ8IXR5 827 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
MSH5-218ENST00000494646 TNFRSF25Q93038 417 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 TMEM143Q96AN5 459 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 NLRP4Q96MN2 994 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 NAP1L4Q99733 375 aaKnown RBP10.75□□□□□ -0.69
MSH5-218ENST00000494646 ELAC1Q9H777 363 aaKnown RBP10.75□□□□□ -0.69
MSH5-218ENST00000494646 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 RNF19AQ9NV58 838 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 RAPGEFL1Q9UHV5 662 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 PCDHA12Q9UN75 941 aa10.75□□□□□ -0.69
MSH5-218ENST00000494646 TBX3O15119 743 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 FGF18O76093 207 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
MSH5-218ENST00000494646 PBX3P40426 434 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 TXKP42681 527 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 NRIP1P48552 1158 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 CDC42EP1Q00587 391 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 ADAM15Q13444 863 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 CALCRLQ16602 461 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 CTC1Q2NKJ3 1217 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 XKR9Q5GH70 373 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 FAM43BQ6ZT52 329 aaPredicted RBP10.74□□□□□ -0.69
MSH5-218ENST00000494646 OTUD6AQ7L8S5 288 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 SLFN12Q8IYM2 578 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 THNSL1Q8IYQ7 743 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 ABI1Q8IZP0 508 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 GJD3Q8N144 294 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 ZNF710Q8N1W2 664 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 COLGALT1Q8NBJ5 622 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 HELQQ8TDG4 1101 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
MSH5-218ENST00000494646 LPPQ93052 612 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 LXNQ9BS40 222 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 TMEM117Q9H0C3 514 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 TRIOO75962 3097 aa10.74□□□□□ -0.69
MSH5-218ENST00000494646 ARID2Q68CP9 1835 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 A0A0U1RQF3 1178 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 NT5C1B-RDH14C9J2C7 533 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 NCK2O43639 380 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 EOMESO95936 686 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 COL9A1P20849 921 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 NDUFV1P49821 464 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 POLGP54098 1239 aaPredicted RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 SPIRE1Q08AE8 756 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 CLLU1OSQ5K130 101 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 TWF2Q6IBS0 349 aaKnown RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 C4orf19Q8IY42 314 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 SLC7A3Q8WY07 619 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 EIF2AK1Q9BQI3 630 aaKnown RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 JPH2Q9BR39 696 aaPredicted RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 INO80BQ9C086 356 aaPredicted RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 ZSWIM4Q9H7M6 989 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 TLE6Q9H808 572 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 TTC12Q9H892 705 aaPredicted RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 DACT1Q9NYF0 836 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 PIN4Q9Y237 131 aaKnown RBP10.73□□□□□ -0.69
MSH5-218ENST00000494646 COL4A3BPQ9Y5P4 624 aa10.73□□□□□ -0.69
MSH5-218ENST00000494646 MEIS3P2A8K0S8 358 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 HOXA2O43364 376 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 MBTPS2O43462 519 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 ATF7P17544 494 aaPredicted RBP10.72□□□□□ -0.69
MSH5-218ENST00000494646 LAG3P18627 525 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 SFPQP23246 707 aaKnown RBP eCLIP10.72□□□□□ -0.69
MSH5-218ENST00000494646 MCM7P33993 719 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 PHKA2P46019 1235 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 RBM10P98175 930 aaKnown RBP10.72□□□□□ -0.69
MSH5-218ENST00000494646 LAMTOR4Q0VGL1 99 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 COL19A1Q14993 1142 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
MSH5-218ENST00000494646 ZNF174Q15697 407 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 PLPP4Q5VZY2 271 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 KCNT2Q6UVM3 1135 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 ZNF598Q86UK7 904 aaKnown RBP10.72□□□□□ -0.69
MSH5-218ENST00000494646 ZNF410Q86VK4 478 aa10.72□□□□□ -0.69
MSH5-218ENST00000494646 PPP2R3CQ969Q6 453 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms