RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	CHD6	Q8TD26	2715 aa		13.92	□□□□□ -0.18
SBF1-208	ENST00000477234	FRYL	O94915	3013 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	KRBA1	A5PL33	1030 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	IFIT3	O14879	490 aa	Known RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	CYTH3	O43739	400 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	TBC1D4	O60343	1298 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	FOXD2	O60548	495 aa	Predicted RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	ATG7	O95352	703 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	C1R	P00736	705 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	EIF4B	P23588	611 aa	Known RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	HSPA4	P34932	840 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	DMWD	Q09019	674 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	KRT32	Q14532	448 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	WTAP	Q15007	396 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	PTPN14	Q15678	1187 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	KIZ	Q2M2Z5	673 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	SPECC1	Q5M775	1068 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	SLC44A3	Q8N4M1	653 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	BBX	Q8WY36	941 aa	Predicted RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	DDX1	Q92499	740 aa	Known RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	IGSF21	Q96ID5	467 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	OSMR	Q99650	979 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	IL25	Q9H293	177 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	WDR6	Q9NNW5	1121 aa	Known RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	SLC2A4RG	Q9NR83	387 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	PKD2L1	Q9P0L9	805 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	TCEAL9	Q9UHQ7	104 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	GMEB2	Q9UKD1	530 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	CA14	Q9ULX7	337 aa		13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	RBM8A	Q9Y5S9	174 aa	Known RBP	13.91	□□□□□ -0.18
SBF1-208	ENST00000477234	GPR179	Q6PRD1	2367 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	PBX3	P40426	434 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	PTH1R	Q03431	593 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	TROAP	Q12815	778 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	MIS18BP1	Q6P0N0	1132 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	DCLRE1A	Q6PJP8	1040 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	DCLK2	Q8N568	766 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	METTL13	Q8N6R0	699 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	RNF169	Q8NCN4	708 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	PJA1	Q8NG27	643 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	ZBTB10	Q96DT7	871 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	MXRA8	Q9BRK3	442 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	OSBPL6	Q9BZF3	934 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	CHST12	Q9NRB3	414 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	MRPL17	Q9NRX2	175 aa	Known RBP	13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	MIA3	Q5JRA6	1907 aa		13.9	□□□□□ -0.18
SBF1-208	ENST00000477234	IGKV6D-21	A0A0A0MT36	114 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	NCAM2	O15394	837 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	GPR32	O75388	356 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	FOS	P01100	380 aa	Predicted RBP	13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	ADH1A	P07327	375 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	DCN	P07585	359 aa	Known RBP	13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	PSMA5	P28066	241 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	CLCN4	P51793	760 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	STARD6	P59095	220 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	RNASEL	Q05823	741 aa	Known RBP	13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	NECTIN1	Q15223	517 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	PDXDC2P	Q6P474	469 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	GLB1L	Q6UWU2	654 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	RALYL	Q86SE5	291 aa	Known RBP	13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	CKAP2L	Q8IYA6	745 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	HDAC7	Q8WUI4	952 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	FAM167A	Q96KS9	214 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	CDHR5	Q9HBB8	845 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	ZNF302	Q9NR11	478 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	DLGAP2	Q9P1A6	1054 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	RAB23	Q9ULC3	237 aa		13.89	□□□□□ -0.19
SBF1-208	ENST00000477234	LRP3	O75074	770 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	PPP2R5D	Q14738	602 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	CEP55	Q53EZ4	464 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	CLLU1OS	Q5K130	101 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	TMTC2	Q8N394	836 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	NETO1	Q8TDF5	533 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	HELQ	Q8TDG4	1101 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	PHKB	Q93100	1093 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	SCLT1	Q96NL6	688 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	NELL2	Q99435	816 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	TRAIP	Q9BWF2	469 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	GLT8D2	Q9H1C3	349 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	RNF19A	Q9NV58	838 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	ZSCAN32	Q9NX65	697 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	USP18	Q9UMW8	372 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	PCDHA6	Q9UN73	950 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	AKT3	Q9Y243	479 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	PCDHA8	Q9Y5H6	950 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	C2orf16	Q68DN1	1984 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	CLUH	O75153	1309 aa		13.88	□□□□□ -0.19
SBF1-208	ENST00000477234	NT5C1B-RDH14	C9J2C7	533 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	NARS	O43776	548 aa	Known RBP	13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	DDAH1	O94760	285 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	C22orf31	O95567	290 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	ANP32A	P39687	249 aa	Known RBP	13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	RAB27A	P51159	221 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	NLRP11	P59045	1033 aa	Known RBP	13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	PFKP	Q01813	784 aa		13.87	□□□□□ -0.19
SBF1-208	ENST00000477234	PRKCQ	Q04759	706 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms