RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 HLA-DPA1P20036 260 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 HOXC9P31274 260 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 PMS1P54277 932 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 ERMARDQ5T6L9 678 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 NEO1Q92859 1461 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 KDM3AQ9Y4C1 1321 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 GAS7O60861 476 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 APOA1P02647 267 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 PRCPP42785 496 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 CYP2J2P51589 502 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 ZBED6P86452 979 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 KLHDC7AQ5VTJ3 777 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 DNAAF3Q8N9W5 541 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 TEX12Q9BXU0 123 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 SUN2Q9UH99 717 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 SNX5Q9Y5X3 404 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 NRXN3Q9Y4C0 1643 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 H7C1D1 291 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 LMNAP02545 664 aaKnown RBP12.3□□□□□ -0.44
U2AF1-209ENST00000475639 PTK2Q05397 1052 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ZFAND2BQ8WV99 257 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
U2AF1-209ENST00000475639 TOPAZ1Q8N9V7 1692 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 MYH7BA7E2Y1 1941 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 AFF2P51816 1311 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 RAD51CO43502 376 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 MT-ND3P03897 115 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 SRGNP10124 158 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 LIG4P49917 911 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 CCNG1P51959 295 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ADAT2Q7Z6V5 191 aaKnown RBP12.3□□□□□ -0.44
U2AF1-209ENST00000475639 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
U2AF1-209ENST00000475639 MSH2P43246 934 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ARHGAP22Q7Z5H3 698 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 TEKT4Q8WW24 435 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 USP6NLQ92738 828 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 MTMR8Q96EF0 704 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 VPS39Q96JC1 886 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 FAM193BQ96PV7 902 aaPredicted RBP12.3□□□□□ -0.44
U2AF1-209ENST00000475639 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ING2Q9H160 280 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 ITM2BQ9Y287 266 aa12.3□□□□□ -0.44
U2AF1-209ENST00000475639 A0A1B0GW55 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 CFLARO15519 480 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 CREB3O43889 395 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 PRDM1O75626 825 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 SERPINB2P05120 415 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4L2P0CJ85 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4L3P0CJ86 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4L4P0CJ87 422 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4L5P0CJ88 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4L6P0CJ89 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4L7P0CJ90 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 EIF6P56537 245 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 NCALDP61601 193 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 C1QTNF12Q5T7M4 302 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 AGBL2Q5U5Z8 902 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 TRPM8Q7Z2W7 1104 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 PIGWQ7Z7B1 504 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 TBC1D10CQ8IV04 446 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 TAB3Q8N5C8 712 aaPredicted RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 GORASP1Q9BQQ3 440 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 FAM129AQ9BZQ8 928 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ARHGAP20Q9P2F6 1191 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 DUX4Q9UBX2 424 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 GPR75-ASB3A0A0A6YYF3 556 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ERVK-9P63128 1117 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ITIH4Q14624 930 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 NUGGCQ68CJ6 796 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 FAM81AQ8TBF8 368 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ATP8A2Q9NTI2 1148 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 OLA1Q9NTK5 396 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 CPSF3Q9UKF6 684 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ASB3Q9Y575 518 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 A2ML1A8K2U0 1454 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 FAM95CA0A1B0GW59 222 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 OCM2P0CE71 109 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 OCMP0CE72 109 aaPredicted RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 RARAP10276 462 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 CDK17Q00537 523 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 PDIA6Q15084 440 aa12.29□□□□□ -0.44
U2AF1-209ENST00000475639 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 ZNF658Q5TYW1 1059 aaPredicted RBP12.29□□□□□ -0.44
U2AF1-209ENST00000475639 FAM178BQ8IXR5 827 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms