RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CWH43Q9H720 699 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 TYW1Q9NV66 732 aaKnown RBP10.1□□□□□ -0.79
USF1-204ENST00000472217 CLDND1Q9NY35 253 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 PCDHA12Q9UN75 941 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
USF1-204ENST00000472217 A0A0U1RQF3 1178 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 ZBTB39O15060 712 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 LINC01565O15544 149 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 HOXA2O43364 376 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 FGF18O76093 207 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 SLITRK3O94933 977 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 ATF7P17544 494 aaPredicted RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 SFPQP23246 707 aaKnown RBP eCLIP10.09□□□□□ -0.79
USF1-204ENST00000472217 LTBRP36941 435 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 RFC5P40937 340 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 DLX2Q07687 328 aaPredicted RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 CTC1Q2NKJ3 1217 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 XKR9Q5GH70 373 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 CLLU1OSQ5K130 101 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 LRRC55Q6ZSA7 311 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 TPH2Q8IWU9 490 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 THNSL1Q8IYQ7 743 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 LRRC43Q8N309 656 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 TMEM143Q96AN5 459 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 EIF2AK1Q9BQI3 630 aaKnown RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 LLPHQ9BRT6 129 aaKnown RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 IGFLR1Q9H665 355 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 ZSWIM4Q9H7M6 989 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 TTC12Q9H892 705 aaPredicted RBP10.09□□□□□ -0.79
USF1-204ENST00000472217 IFT122Q9HBG6 1241 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 CD320Q9NPF0 282 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 CHST12Q9NRB3 414 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 DACT1Q9NYF0 836 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 PPME1Q9Y570 386 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 PCDHGC5Q9Y5F6 944 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 COL4A3BPQ9Y5P4 624 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 XIRP2A4UGR9 3374 aa10.09□□□□□ -0.79
USF1-204ENST00000472217 NCK2O43639 380 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 TBX10O75333 385 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 LAG3P18627 525 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 MCM7P33993 719 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 PBX3P40426 434 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 TXKP42681 527 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 UBE3AQ05086 875 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 EMC2Q15006 297 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 SAFBQ15424 915 aaKnown RBP eCLIP10.08□□□□□ -0.8
USF1-204ENST00000472217 CSPP1Q1MSJ5 1256 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 PUS10Q3MIT2 529 aaKnown RBP10.08□□□□□ -0.8
USF1-204ENST00000472217 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
USF1-204ENST00000472217 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 CATSPER4Q7RTX7 472 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 FAM178BQ8IXR5 827 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 EXOC8Q8IYI6 725 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 ABI1Q8IZP0 508 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 HELQQ8TDG4 1101 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 PRPF31Q8WWY3 499 aaKnown RBP10.08□□□□□ -0.8
USF1-204ENST00000472217 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
USF1-204ENST00000472217 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.8
USF1-204ENST00000472217 PPP2R3CQ969Q6 453 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 C8orf76Q96K31 380 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 ZSCAN31Q96LW9 406 aaPredicted RBP10.08□□□□□ -0.8
USF1-204ENST00000472217 MTMR9Q96QG7 549 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 HSD17B14Q9BPX1 270 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 TRAIPQ9BWF2 469 aa10.08□□□□□ -0.8
USF1-204ENST00000472217 PIN4Q9Y237 131 aaKnown RBP10.08□□□□□ -0.8
USF1-204ENST00000472217 POTEMA6NI47 508 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 GAS2O43903 313 aaKnown RBP10.07□□□□□ -0.8
USF1-204ENST00000472217 LYPLA2O95372 231 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 EOMESO95936 686 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 SRGAP2CP0DJJ0 459 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 ATP2B1P20020 1258 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 PHKA2P46019 1235 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 NRIP1P48552 1158 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 RBM25P49756 843 aaKnown RBP10.07□□□□□ -0.8
USF1-204ENST00000472217 HMGN5P82970 282 aaKnown RBP10.07□□□□□ -0.8
USF1-204ENST00000472217 LAMTOR4Q0VGL1 99 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 ADAM15Q13444 863 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 CLUL1Q15846 466 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 KCNT2Q6UVM3 1135 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 RBM23Q86U06 439 aaKnown RBP10.07□□□□□ -0.8
USF1-204ENST00000472217 TCP11Q8WWU5 503 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 ZNF558Q96NG5 402 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 MTRQ99707 1265 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 TMEM60Q9H2L4 133 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 MINDY3Q9H8M7 445 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 XPNPEP1Q9NQW7 623 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 TLR9Q9NR96 1032 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
USF1-204ENST00000472217 BRWD1Q9NSI6 2320 aa10.07□□□□□ -0.8
USF1-204ENST00000472217 MEIS3P2A8K0S8 358 aa10.06□□□□□ -0.8
USF1-204ENST00000472217 GLP2RO95838 553 aa10.06□□□□□ -0.8
USF1-204ENST00000472217 NDUFV1P49821 464 aa10.06□□□□□ -0.8
USF1-204ENST00000472217 RAB27AP51159 221 aa10.06□□□□□ -0.8
USF1-204ENST00000472217 ERVFC1P60507 584 aa10.06□□□□□ -0.8
USF1-204ENST00000472217 PLCB3Q01970 1234 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms