RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 FOXB2Q5VYV0 432 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 MCTP1Q6DN14 999 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 LIN54Q6MZP7 749 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 BRICD5Q6PL45 260 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 RAPH1Q70E73 1250 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 SDCCAG8Q86SQ7 713 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 GPT2Q8TD30 523 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 XDHP47989 1333 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 CCDC66A2RUB6 948 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 CTDNEP1O95476 244 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 CYP11A1P05108 521 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 TPD52P55327 224 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 GBE1Q04446 702 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 MEA1Q16626 185 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 INTS11Q5TA45 600 aaKnown RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 PRR5LQ6MZQ0 368 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 TATDN1Q6P1N9 297 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 LRRTM3Q86VH5 581 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 VSIG1Q86XK7 387 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 CBARPQ8N350 705 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 CELF1Q92879 486 aaKnown RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 MYLK2Q9H1R3 596 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
BRCC3-208ENST00000453705 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 ATP6V0A2Q9Y487 856 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 MYH8P13535 1937 aa8.55□□□□□ -1.04
BRCC3-208ENST00000453705 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 MASP2O00187 686 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SKAP2O75563 359 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 CHGBP05060 677 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 CLTBP09497 229 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 HOXC12P31275 282 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 MINDY4Q4G0A6 757 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 FBXL19Q6PCT2 694 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 EPHX4Q8IUS5 362 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 FBXO27Q8NI29 283 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SUN5Q8TC36 379 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 UCMAQ8WVF2 138 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 ZNF606Q8WXB4 792 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 BAG1Q99933 345 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 DHRS4Q9BTZ2 278 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 NACAP1Q9BZK3 213 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 UNC45AQ9H3U1 944 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 DACT1Q9NYF0 836 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SQORQ9Y6N5 450 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SNED1Q8TER0 1413 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 KIF3CO14782 793 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 GPR39O43194 453 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SLC7A4O43246 635 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 PPP1R12BO60237 982 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 PCNAP12004 261 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 IL1R1P14778 569 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 POLD2P49005 469 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 C17orf67Q0P5P2 114 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 MTMR2Q13614 643 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 COL9A3Q14050 684 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 ZNF267Q14586 743 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SLC15A2Q16348 729 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 OXLD1Q5BKU9 147 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 ANKRD52Q8NB46 1076 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 FNIP1Q8TF40 1166 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 FAM163AQ96GL9 167 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 RBM14Q96PK6 669 aaKnown RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SDF4Q9BRK5 362 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 SCAND2PQ9GZW5 306 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 VTA1Q9NP79 307 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 MAN1C1Q9NR34 630 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 HECAQ9UBI9 543 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 FAM198AQ9UFP1 575 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 POLIQ9UNA4 740 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 ANGEL1Q9UNK9 670 aaKnown RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 MTF2Q9Y483 593 aaPredicted RBP8.54□□□□□ -1.04
BRCC3-208ENST00000453705 FAM205AQ6ZU69 1335 aa8.54□□□□□ -1.04
BRCC3-208ENST00000453705 C3orf80F5H4A9 247 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ST5P78524 1137 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 KLHL30Q0D2K2 578 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 PCBP1Q15365 356 aaKnown RBP eCLIP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 PKN3Q6P5Z2 889 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 RBM43Q6ZSC3 357 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 COL23A1Q86Y22 540 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 MYLK4Q86YV6 388 aaPredicted RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 CEP97Q8IW35 865 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ANKRD35Q8N283 1001 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ESX1Q8N693 406 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 CNBD1Q8NA66 436 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 IGDCC4Q8TDY8 1250 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 EPS8L3Q8TE67 593 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ALKBH8Q96BT7 664 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 RBM17Q96I25 401 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ASB2Q96Q27 587 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 PPARGC1AQ9UBK2 798 aaKnown RBP8.53□□□□□ -1.04
BRCC3-208ENST00000453705 DNM3Q9UQ16 869 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 ZBED4O75132 1171 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 TBC1D8O95759 1140 aa8.53□□□□□ -1.04
BRCC3-208ENST00000453705 GJA9P57773 515 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms