RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CAPN3P20807 821 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 MAP4P27816 1152 aaKnown RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 HSPA7P48741 367 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 LGALS4P56470 323 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 GALNT1Q10472 559 aaPredicted RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 MYBPC3Q14896 1274 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 ADRM1Q16186 407 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 PAN2Q504Q3 1202 aaKnown RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 EMC4Q5J8M3 183 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 RETSATQ6NUM9 610 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 PGBD2Q6P3X8 592 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 ZPBP2Q6X784 338 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 TRAPPC12Q8WVT3 735 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 MYL10Q9BUA6 226 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 ACE2Q9BYF1 805 aaPredicted RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 UNKQ9C0B0 810 aaKnown RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 AKTIPQ9H8T0 292 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 ZMAT3Q9HA38 289 aaKnown RBP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 BTG4Q9NY30 223 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 MARCH2Q9P0N8 246 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 GULP1Q9UBP9 304 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 GRHPRQ9UBQ7 328 aa6.29□□□□□ -1.4
TM9SF3-202ENST00000443638 ITIH6Q6UXX5 1313 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 FAM95CA0A1B0GW59 222 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 POM121BA6NF01 834 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 RRN3P2A6NIE6 340 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 MYO1FO00160 1098 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 THP07101 528 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 CELA3BP08861 270 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 TOMM20Q15388 145 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 MPEG1Q2M385 716 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 UVSSAQ2YD98 709 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 NBPF8Q3BBV2 869 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 CCDC184Q52MB2 194 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 FKBP15Q5T1M5 1219 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 MROH9Q5TGP6 573 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 FAM180BQ6P0A1 224 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 EP400NLQ6ZTU2 488 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 NAT16Q8N8M0 369 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 IL31RAQ8NI17 732 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 RSAD2Q8WXG1 361 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 ASB15Q8WXK1 588 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 TRIM63Q969Q1 353 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 RGMAQ96B86 450 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 MSLNLQ96KJ4 702 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 MYRFLQ96LU7 910 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 KIAA1586Q9HCI6 787 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 ALG13Q9NP73 1137 aaKnown RBP6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 EVLQ9UI08 416 aaPredicted RBP6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 COA3Q9Y2R0 106 aaPredicted RBP6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 CRYL1Q9Y2S2 319 aa6.28□□□□□ -1.4
TM9SF3-202ENST00000443638 KAT6BQ8WYB5 2073 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 A0A1W2PPC4 97 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 DDX3XO00571 662 aaKnown RBP eCLIP6.27□□□□□ -1.412e-50■■■■■ 27.3
TM9SF3-202ENST00000443638 PLA2G6O60733 806 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 CD4P01730 458 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 MAPK10P53779 464 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 NKX6-1P78426 367 aaPredicted RBP6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 TEKQ02763 1124 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 G3BP1Q13283 466 aaKnown RBP eCLIP6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 IL10RAQ13651 578 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 KIAA1841Q6NSI8 718 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 PDXDC1Q6P996 788 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 KLHDC10Q6PID8 442 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 SHISA2Q6UWI4 295 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 UNQ6494/PRO21346Q6UXR6 183 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 LINC00114Q6XXX2 140 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 TBC1D1Q86TI0 1168 aaPredicted RBP6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 CILP2Q8IUL8 1156 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 FAM20CQ8IXL6 584 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 SYTL1Q8IYJ3 562 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 OXR1Q8N573 874 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 FAM26EQ8N5C1 309 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 ZNF527Q8NB42 609 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 NLGN2Q8NFZ4 835 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 GIMAP7Q8NHV1 300 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 SCARF2Q96GP6 870 aaPredicted RBP6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 FCRL2Q96LA5 508 aaPredicted RBP6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 UNC45AQ9H3U1 944 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 ITM2CQ9NQX7 267 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 FBLN5Q9UBX5 448 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 PRSS50Q9UI38 385 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 PCDHB1Q9Y5F3 818 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 SNX13Q9Y5W8 968 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 CDY2AQ9Y6F7 541 aa6.27□□□□□ -1.41
TM9SF3-202ENST00000443638 UBA6A0AVT1 1052 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 A6NCN8 305 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 F8W8V4 182 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 FAM229AH3BQW9 127 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 KRIT1O00522 736 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 SLC16A6O15403 523 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms