RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 AIFM3Q96NN9 605 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 MRPL9Q9BYD2 267 aaKnown RBP23.3■■□□□ 1.32
CPNE1-219ENST00000440240 ENTPD7Q9NQZ7 604 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 PIEZO1Q92508 2521 aa23.3■■□□□ 1.32
CPNE1-219ENST00000440240 LOC730098B7Z3J9 87 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 ATF7P17544 494 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-219ENST00000440240 SFPQP23246 707 aaKnown RBP eCLIP23.29■■□□□ 1.328e-7■□□□□ 11.1
CPNE1-219ENST00000440240 LETM2Q2VYF4 491 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 CLLU1OSQ5K130 101 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 PLPP4Q5VZY2 271 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 TMC7Q7Z402 723 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 ZNF410Q86VK4 478 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 TRAIPQ9BWF2 469 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 PHF7Q9BWX1 381 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-219ENST00000440240 SLKQ9H2G2 1235 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-219ENST00000440240 SUCLA2Q9P2R7 463 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-219ENST00000440240 WDR81Q562E7 1941 aa23.29■■□□□ 1.32
CPNE1-219ENST00000440240 A0A087WZ62 844 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 CCDC194A0A1B0GVG4 234 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 CSDE1O75534 798 aaKnown RBP23.28■■□□□ 1.32
CPNE1-219ENST00000440240 SKIP12755 728 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 GCFC2P16383 781 aaKnown RBP23.28■■□□□ 1.32
CPNE1-219ENST00000440240 ALDH7A1P49419 539 aaKnown RBP23.28■■□□□ 1.32
CPNE1-219ENST00000440240 KCNC3Q14003 757 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 CBX2Q14781 532 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-219ENST00000440240 PPP4R3AQ6IN85 833 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 EXOC8Q8IYI6 725 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 VN1R2Q8NFZ6 395 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 EDAQ92838 391 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 MFSD14AQ96MC6 490 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 NAP1L4Q99733 375 aaKnown RBP23.28■■□□□ 1.32
CPNE1-219ENST00000440240 FDXACB1Q9BRP7 624 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-219ENST00000440240 PHF20Q9BVI0 1012 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 KCNH6Q9H252 994 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 KCNJ14Q9UNX9 436 aa23.28■■□□□ 1.32
CPNE1-219ENST00000440240 TRIOO75962 3097 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 CARNS1A5YM72 827 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 TMEM150BA6NC51 233 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 QARSP47897 775 aaKnown RBP23.27■■□□□ 1.32
CPNE1-219ENST00000440240 RBM10P98175 930 aaKnown RBP23.27■■□□□ 1.32
CPNE1-219ENST00000440240 PPP2R5CQ13362 524 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 BMS1Q14692 1282 aaKnown RBP23.27■■□□□ 1.32
CPNE1-219ENST00000440240 ANO5Q75V66 913 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 NEK8Q86SG6 692 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 RHPN2Q8IUC4 686 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 HELQQ8TDG4 1101 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 SH2D3AQ9BRG2 576 aa23.27■■□□□ 1.32
CPNE1-219ENST00000440240 SLC37A4O43826 429 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 HOXB8P17481 243 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-219ENST00000440240 PBX3P40426 434 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 PHKA2P46019 1235 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 SCRN1Q12765 414 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 TWF2Q6IBS0 349 aaKnown RBP23.26■■□□□ 1.31
CPNE1-219ENST00000440240 ANKRD54Q6NXT1 300 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 HFE2Q6ZVN8 426 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 SLC39A11Q8N1S5 342 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 MRPL43Q8N983 215 aaKnown RBP23.26■■□□□ 1.31
CPNE1-219ENST00000440240 SUSD6Q92537 303 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 KCNMB3Q9NPA1 279 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 CYP26B1Q9NR63 512 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 PPME1Q9Y570 386 aa23.26■■□□□ 1.31
CPNE1-219ENST00000440240 HIDE1A8MVS5 230 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 EML1O00423 815 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 TBX3O15119 743 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 MARCH6O60337 910 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 P4HBP07237 508 aaKnown RBP23.25■■□□□ 1.31
CPNE1-219ENST00000440240 TECP42680 631 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 SMC1AQ14683 1233 aaKnown RBP23.25■■□□□ 1.31
CPNE1-219ENST00000440240 SLC7A3Q8WY07 619 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 RPGRIP1Q96KN7 1286 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 S1PR5Q9H228 398 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 STK36Q9NRP7 1315 aa23.25■■□□□ 1.31
CPNE1-219ENST00000440240 ZNF623O75123 536 aa23.24■■□□□ 1.31
CPNE1-219ENST00000440240 RAB27AP51159 221 aa23.24■■□□□ 1.31
CPNE1-219ENST00000440240 CATSPER4Q7RTX7 472 aa23.24■■□□□ 1.31
CPNE1-219ENST00000440240 TMEM169Q96HH4 297 aa23.24■■□□□ 1.31
CPNE1-219ENST00000440240 VAV3Q9UKW4 847 aa23.24■■□□□ 1.31
CPNE1-219ENST00000440240 PIN4Q9Y237 131 aaKnown RBP23.24■■□□□ 1.31
CPNE1-219ENST00000440240 CCNT1O60563 726 aaKnown RBP23.23■■□□□ 1.31
CPNE1-219ENST00000440240 PFKFB2O60825 505 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 BCAR1P56945 870 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 ANKRD1Q15327 319 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 GLB1LQ6UWU2 654 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 BMP8AQ7Z5Y6 402 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 KSR1Q8IVT5 923 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 WASF1Q92558 559 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 CASP10Q92851 521 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 NLRP4Q96MN2 994 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 FAM105AQ9NUU6 356 aa23.23■■□□□ 1.31
CPNE1-219ENST00000440240 RFC5P40937 340 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 NPEPPSP55786 919 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 EPHA7Q15375 998 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 TPRNQ4KMQ1 711 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 PLA2G4FQ68DD2 849 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 LLGL2Q6P1M3 1020 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 SYCE2Q6PIF2 218 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 TRIM67Q6ZTA4 783 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 PIK3AP1Q6ZUJ8 805 aa23.22■■□□□ 1.31
CPNE1-219ENST00000440240 OTUD6AQ7L8S5 288 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms