RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 ODR4Q5SWX8 454 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 PLPP4Q5VZY2 271 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 GALNT17Q6IS24 598 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 ADHFE1Q8IWW8 467 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 EFHBQ8N7U6 833 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 HELQQ8TDG4 1101 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 TNFRSF25Q93038 417 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 KIF2CQ99661 725 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 TMEM117Q9H0C3 514 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 ORC3Q9UBD5 711 aaPredicted RBP25.46■■□□□ 1.67
HOMER3-203ENST00000433218 PCDHB12Q9Y5F1 795 aa25.46■■□□□ 1.67
HOMER3-203ENST00000433218 DDX11L8A8MPP1 907 aa25.45■■□□□ 1.66
HOMER3-203ENST00000433218 FSCN2O14926 492 aa25.45■■□□□ 1.66
HOMER3-203ENST00000433218 SPIRE1Q08AE8 756 aa25.45■■□□□ 1.66
HOMER3-203ENST00000433218 LPPQ93052 612 aa25.45■■□□□ 1.66
HOMER3-203ENST00000433218 C2orf16Q68DN1 1984 aa25.44■■□□□ 1.66
HOMER3-203ENST00000433218 ZBTB39O15060 712 aa25.44■■□□□ 1.66
HOMER3-203ENST00000433218 CCNT1O60563 726 aaKnown RBP25.44■■□□□ 1.66
HOMER3-203ENST00000433218 JAK2O60674 1132 aa25.44■■□□□ 1.66
HOMER3-203ENST00000433218 CDKL5O76039 1030 aa25.44■■□□□ 1.66
HOMER3-203ENST00000433218 RHPN2Q8IUC4 686 aa25.44■■□□□ 1.66
HOMER3-203ENST00000433218 SMRP1Q8NCR6 262 aa25.44■■□□□ 1.66
HOMER3-203ENST00000433218 NCK2O43639 380 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 GPR37L1O60883 481 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 MAFO75444 373 aaPredicted RBP25.43■■□□□ 1.66
HOMER3-203ENST00000433218 LAG3P18627 525 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 PSMC5P62195 406 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 TMEM173Q86WV6 379 aaPredicted RBP25.43■■□□□ 1.66
HOMER3-203ENST00000433218 LRRC43Q8N309 656 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 GTF3C6Q969F1 213 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 NLRP4Q96MN2 994 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 RGL1Q9NZL6 768 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 SUCLA2Q9P2R7 463 aaPredicted RBP25.43■■□□□ 1.66
HOMER3-203ENST00000433218 CDH22Q9UJ99 828 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 DENND4AQ7Z401 1863 aa25.43■■□□□ 1.66
HOMER3-203ENST00000433218 PLXNA3P51805 1871 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 HIDE1A8MVS5 230 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 B4GALT3O60512 393 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 ZSCAN20P17040 1043 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-203ENST00000433218 KCNT2Q6UVM3 1135 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 FAM177A1Q8N128 213 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-203ENST00000433218 NSUN7Q8NE18 718 aaKnown RBP25.42■■□□□ 1.66
HOMER3-203ENST00000433218 LXNQ9BS40 222 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 CYP26B1Q9NR63 512 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 PRKAG3Q9UGI9 489 aa25.42■■□□□ 1.66
HOMER3-203ENST00000433218 KMT2EQ8IZD2 1858 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 A0A0U1RQF3 1178 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 EYA4O95677 639 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 CYP4A11Q02928 519 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 NCAPH2Q6IBW4 605 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 PPP4R3AQ6IN85 833 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 MICAL1Q8TDZ2 1067 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 TLE6Q9H808 572 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 MINDY3Q9H8M7 445 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 AAASQ9NRG9 546 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 MUTYHQ9UIF7 546 aa25.41■■□□□ 1.66
HOMER3-203ENST00000433218 NT5C1B-RDH14C9J2C7 533 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 ST18O60284 1047 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 UBE3AQ05086 875 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 DUSP6Q16828 381 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 MRPS27Q92552 414 aaKnown RBP25.4■■□□□ 1.66
HOMER3-203ENST00000433218 TMEM143Q96AN5 459 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 DYDC2Q96IM9 177 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 TCF25Q9BQ70 676 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 GCOM2Q9BZD3 368 aaPredicted RBP25.4■■□□□ 1.66
HOMER3-203ENST00000433218 IFT122Q9HBG6 1241 aa25.4■■□□□ 1.66
HOMER3-203ENST00000433218 PIN4Q9Y237 131 aaKnown RBP25.4■■□□□ 1.66
HOMER3-203ENST00000433218 USP15Q9Y4E8 981 aaPredicted RBP25.4■■□□□ 1.66
HOMER3-203ENST00000433218 PHKA2P46019 1235 aa25.39■■□□□ 1.66
HOMER3-203ENST00000433218 QARSP47897 775 aaKnown RBP25.39■■□□□ 1.66
HOMER3-203ENST00000433218 CTTNQ14247 550 aaKnown RBP25.39■■□□□ 1.66
HOMER3-203ENST00000433218 BCL7CQ8WUZ0 217 aaPredicted RBP25.39■■□□□ 1.66
HOMER3-203ENST00000433218 APOL5Q9BWW9 433 aa25.39■■□□□ 1.66
HOMER3-203ENST00000433218 FAM50BQ9Y247 325 aa25.39■■□□□ 1.66
HOMER3-203ENST00000433218 DCXO43602 365 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 GCFC2P16383 781 aaKnown RBP25.38■■□□□ 1.65
HOMER3-203ENST00000433218 COASYQ13057 564 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 KCNC3Q14003 757 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 LLGL2Q6P1M3 1020 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 ABI1Q8IZP0 508 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 PPP2R3CQ969Q6 453 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 FAM20AQ96MK3 541 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 ZNF558Q96NG5 402 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 ENTPD7Q9NQZ7 604 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 MYO10Q9HD67 2058 aa25.38■■□□□ 1.65
HOMER3-203ENST00000433218 HOXA2O43364 376 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 KRT2P35908 639 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 PLA2G5P39877 138 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 PLCB3Q01970 1234 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 TWF2Q6IBS0 349 aaKnown RBP25.37■■□□□ 1.65
HOMER3-203ENST00000433218 SLC39A11Q8N1S5 342 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 FEZF2Q8TBJ5 459 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 CEP170P1Q96L14 293 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 DHX33Q9H6R0 707 aaKnown RBP25.37■■□□□ 1.65
HOMER3-203ENST00000433218 COL4A3BPQ9Y5P4 624 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 SFPQP23246 707 aaKnown RBP eCLIP25.37■■□□□ 1.65
HOMER3-203ENST00000433218 AFF1P51825 1210 aaKnown RBP25.37■■□□□ 1.65
HOMER3-203ENST00000433218 ZNF410Q86VK4 478 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 XPNPEP1Q9NQW7 623 aa25.37■■□□□ 1.65
HOMER3-203ENST00000433218 BTBD18B2RXH4 712 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms