RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SLC5A4Q9NY91 659 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 ADAM22Q9P0K1 906 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 DDX3YO15523 660 aaKnown RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 AGTP01019 485 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 CCND1P24385 295 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 PCK1P35558 622 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 PDIA5Q14554 519 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 MESDQ14696 234 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 TAOK1Q7L7X3 1001 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 ADAM33Q9BZ11 813 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 TXLNGYQ9BZA5 131 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L15C9J2P7 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L13C9JLJ4 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L11C9JVI0 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L18D6R9N7 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L22D6RA61 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L17D6RBQ6 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L19D6RCP7 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L20D6RJB6 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 NUDT17P0C025 328 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L24Q0WX57 530 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 RIPK1Q13546 671 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 AP1ARQ63HQ0 302 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 CCDC137Q6PK04 289 aaKnown RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP17L6PQ6QN14 398 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 SLFN11Q7Z7L1 901 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 HOMER3Q9NSC5 361 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 ZMYND8Q9ULU4 1186 aaPredicted RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 ATMINO43313 823 aaPredicted RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 SMNDC1O75940 238 aaKnown RBP eCLIP17.95■□□□□ 0.462e-7■■■□□ 16.2
PKP4-204ENST00000421462 TNFAIP3P21580 790 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 ABL2P42684 1182 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 SESN3P58005 492 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 DRAP1Q14919 205 aaPredicted RBP17.95■□□□□ 0.46
PKP4-204ENST00000421462 USP40Q9NVE5 1235 aa17.95■□□□□ 0.46
PKP4-204ENST00000421462 BTNL10A8MVZ5 291 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 RIPK2O43353 540 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 MED24O75448 989 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 PLS1Q14651 629 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 TTBK2Q6IQ55 1244 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 TTC27Q6P3X3 843 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 SPATA21Q7Z572 469 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 SEC14L1Q92503 715 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 PWWP2AQ96N64 755 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 NKX1-2Q9UD57 310 aaPredicted RBP17.94■□□□□ 0.46
PKP4-204ENST00000421462 STX2P32856 288 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 ZNF449Q6P9G9 518 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 SLC30A10Q6XR72 485 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 RFFLQ8WZ73 363 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 BTBD6Q96KE9 485 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 IFT74Q96LB3 600 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 GRHL1Q9NZI5 618 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 COG5Q9UP83 839 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 PCDHA2Q9Y5H9 948 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 ALG6Q9Y672 507 aa17.94■□□□□ 0.46
PKP4-204ENST00000421462 TRIM49P0CI25 452 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 TRIM49CP0CI26 452 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 EPHA7Q15375 998 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 ARSHQ5FYA8 562 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 ARHGAP27Q6ZUM4 889 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 VSIG1Q86XK7 387 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 MRRFQ96E11 262 aaKnown RBP17.93■□□□□ 0.46
PKP4-204ENST00000421462 TGS1Q96RS0 853 aaKnown RBP17.93■□□□□ 0.46
PKP4-204ENST00000421462 DNAJC12Q9UKB3 198 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 BHMG1C9JSJ3 638 aaPredicted RBP17.93■□□□□ 0.46
PKP4-204ENST00000421462 HIP1RO75146 1068 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 NR3C1P04150 777 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 RPS8P62241 208 aaKnown RBP17.93■□□□□ 0.46
PKP4-204ENST00000421462 KNOP1Q1ED39 458 aaKnown RBP17.93■□□□□ 0.46
PKP4-204ENST00000421462 ANKIB1Q9P2G1 1089 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 ARAP2Q8WZ64 1704 aa17.93■□□□□ 0.46
PKP4-204ENST00000421462 PRELID2Q8N945 189 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 REEP2Q9BRK0 252 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 KCNMB3Q9NPA1 279 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 SIX2Q9NPC8 291 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 BRAFP15056 766 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 PICALMQ13492 652 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 CTTNQ14247 550 aaKnown RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 SRRM1Q8IYB3 904 aaKnown RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 ZDHHC14Q8IZN3 488 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 NAP1L3Q99457 506 aaPredicted RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 KLHL14Q9P2G3 628 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 PFASO15067 1338 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 TARSP26639 723 aaKnown RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 CTCFP49711 727 aaPredicted RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 CYP2J2P51589 502 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 RAD23BP54727 409 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 BNIP1Q12981 228 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 SLC35C1Q96A29 364 aa17.92■□□□□ 0.46
PKP4-204ENST00000421462 NAF1Q96HR8 494 aaKnown RBP17.92■□□□□ 0.46
PKP4-204ENST00000421462 SMIM24O75264 130 aa17.91■□□□□ 0.46
PKP4-204ENST00000421462 BAG3O95817 575 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms