RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MGEA5O60502 916 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 LPXNO60711 386 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 RPS6KA5O75582 802 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 CD2BP2O95400 341 aaKnown RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 GCFC2P16383 781 aaKnown RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 RBM25P49756 843 aaKnown RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 GATMP50440 423 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 ERVK-21P61565 698 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 NFX1Q12986 1120 aaKnown RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 PAK2Q13177 524 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 DRP2Q13474 957 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 PLA2G4FQ68DD2 849 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 NCAPH2Q6IBW4 605 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 PPP4R3AQ6IN85 833 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 EFCAB12Q6NXP0 572 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 NME8Q8N427 588 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 LINC01465Q8N7H1 131 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 RDM1Q8NG50 284 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 C8orf76Q96K31 380 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 FAM20AQ96MK3 541 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 TGS1Q96RS0 853 aaKnown RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 SUGCTQ9HAC7 445 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 ERVK-5Q9HDB9 667 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 NRBP2Q9NSY0 501 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 WRAP73Q9P2S5 460 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 CEP131Q9UPN4 1083 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 AKT3Q9Y243 479 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 INSL6Q9Y581 213 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 MTCH2Q9Y6C9 303 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 COL4A6Q14031 1691 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 KDM3AQ9Y4C1 1321 aa6.48□□□□□ -1.37
HMGB1P20-201ENST00000402555 NLRC5Q86WI3 1866 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 A0A087WWV3 80 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZBTB39O15060 712 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 MAGEB2O15479 319 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 GDF9O60383 454 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 GPR32O75388 356 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 CSDE1O75534 798 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 CSPG5O95196 566 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 RPLP2P05387 115 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 FGFR4P22455 802 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 CRYBB1P53674 252 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 NPEPPSP55786 919 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 NLRP11P59045 1033 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 PSMC5P62195 406 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 CYP4A11Q02928 519 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 SPIRE1Q08AE8 756 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 TBC1D8BQ0IIM8 1120 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 PPP2R5CQ13362 524 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 CTTNQ14247 550 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 RABEP1Q15276 862 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 SKIV2LQ15477 1246 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 PAN2Q504Q3 1202 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 XKR3Q5GH77 459 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 ANO5Q75V66 913 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 FAM228AQ86W67 206 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 DYDC2Q96IM9 177 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZSCAN31Q96LW9 406 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 SCLT1Q96NL6 688 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 CEP89Q96ST8 783 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 MAP7D2Q96T17 732 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 ADAM2Q99965 735 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 LLPHQ9BRT6 129 aaKnown RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 TMEM60Q9H2L4 133 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 ADAMTS10Q9H324 1103 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 ST3GAL5Q9UNP4 418 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 SQORQ9Y6N5 450 aa6.47□□□□□ -1.37
HMGB1P20-201ENST00000402555 DLL1O00548 723 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 TBX3O15119 743 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 NEMFO60524 1076 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 BAG4O95429 457 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 P4HBP07237 508 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 LINC00271P0C7V0 271 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 TMOD1P28289 359 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 MCM7P33993 719 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 CTNNB1P35222 781 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 TXKP42681 527 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 QARSP47897 775 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 GPC3P51654 580 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 HMGN5P82970 282 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 TFF2Q03403 129 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 BTG3Q14201 252 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 EPHA7Q15375 998 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 SAFBQ15424 915 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZNF174Q15697 407 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 CALCRLQ16602 461 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 EPC2Q52LR7 807 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 NPAS4Q8IUM7 802 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 KSR1Q8IVT5 923 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 TPH2Q8IWU9 490 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 CRIPAKQ8N1N5 446 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 FIBCD1Q8N539 461 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 FAM160A2Q8N612 972 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 FAM184AQ8NB25 1140 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 FBXO18Q8NFZ0 1043 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms