RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 GH2P01242 217 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 CCDC172P0C7W6 258 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 GAP43P17677 238 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 NPEPPSP55786 919 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 STK33Q9BYT3 514 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 STK32BQ9NY57 414 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 WRAP73Q9P2S5 460 aaPredicted RBP13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 BCS1LQ9Y276 419 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 STK24Q9Y6E0 443 aa13.56□□□□□ -0.24
PPP3CB-204ENST00000394829 DCDC2CA8MYV0 355 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 EIF3DO15371 548 aaKnown RBP eCLIP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 MEFVO15553 781 aaPredicted RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 CFBP00751 764 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 CYP3A4P08684 503 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 TMOD1P28289 359 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 POU5F1Q01860 360 aaKnown RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 ARHGAP44Q17R89 818 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 CCDC26Q8TAB7 109 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 IDI2Q9BXS1 227 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 PRR12Q9ULL5 1215 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 PPATQ06203 517 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 SYT11Q9BT88 431 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 SEPT11Q9NVA2 429 aaKnown RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 CAPN7Q9Y6W3 813 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 PPP1R12BO60237 982 aaPredicted RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 PSMD10O75832 226 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 LMNB1P20700 586 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 DHX9Q08211 1270 aaKnown RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 OTUD6BQ8N6M0 293 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 THAP2Q9H0W7 228 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 ERVK-5Q9HDB9 667 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 CNOT8Q9UFF9 292 aaKnown RBP13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 SLC12A6Q9UHW9 1150 aa13.55□□□□□ -0.24
PPP3CB-204ENST00000394829 ZNF646O15015 1829 aaPredicted RBP13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 LRRN2O75325 713 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 KIAA0754O94854 1291 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 FAM107AO95990 144 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 PLS1Q14651 629 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 ODF2Q5BJF6 829 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 CTNNBL1Q8WYA6 563 aaPredicted RBP13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 SEC14L1Q92503 715 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 INTS2Q9H0H0 1204 aaKnown RBP13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 AGPAT3Q9NRZ7 376 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 NOVA2Q9UNW9 492 aaKnown RBP13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 COG5Q9UP83 839 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 NCANO14594 1321 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 ECE1P42892 770 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
PPP3CB-204ENST00000394829 PIK3CDO00329 1044 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 BACH1O14867 736 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 PHLDB3Q6NSJ2 640 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 AADACL2Q6P093 401 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 PODNQ7Z5L7 613 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 ARFGAP2Q8N6H7 521 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 TDRD3Q9H7E2 651 aaKnown RBP13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 SUFUQ9UMX1 484 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 FRMPD4Q14CM0 1322 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 FNTAP49354 379 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 NFIL3Q16649 462 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 BTNL9Q6UXG8 535 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 RUFY4Q6ZNE9 571 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 MMS22LQ6ZRQ5 1243 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 GLG1Q92896 1179 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 MKNK1Q9BUB5 465 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 DMAC2Q9NW81 257 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 TMOD4Q9NZQ9 345 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 TTC7AQ9ULT0 858 aaPredicted RBP13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 ATP8A1Q9Y2Q0 1164 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 FOXN3O00409 490 aaPredicted RBP13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 HNRNPH1P31943 449 aaKnown RBP13.53□□□□□ -0.24
PPP3CB-204ENST00000394829 IFT88Q13099 833 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms