RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 USH1GQ495M9 461 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 OGFOD1Q8N543 542 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 EIF2AK1Q9BQI3 630 aaKnown RBP19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 AMNQ9BXJ7 453 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 DPH5Q9H2P9 285 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 RGL1Q9NZL6 768 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 NYAP2Q9P242 653 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 RABGAP1Q9Y3P9 1069 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 IGSF9BQ9UPX0 1349 aa19.92■□□□□ 0.78
PCDHA1-202ENST00000394633 F8VZ95 297 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 DDX3YO15523 660 aaKnown RBP19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 TMOD1P28289 359 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 SOX5P35711 763 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 RNF187Q5TA31 235 aaPredicted RBP19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 SIAH1Q8IUQ4 282 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 GLYCTKQ8IVS8 523 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 FAM186BQ8IYM0 893 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 PLCD3Q8N3E9 789 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 AGBL3Q8NEM8 1001 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 CYP2W1Q8TAV3 490 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 SLC35G2Q8TBE7 412 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 POLR3CQ9BUI4 534 aaPredicted RBP19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 LRRC4CQ9HCJ2 640 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 OLFML3Q9NRN5 406 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 PPP1R9AQ9ULJ8 1098 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 TTC7AQ9ULT0 858 aaPredicted RBP19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 NR2E1Q9Y466 385 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 STK24Q9Y6E0 443 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 RBBP6Q7Z6E9 1792 aaKnown RBP19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 GMNCA6NCL1 334 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 SPDYE3A6NKU9 549 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 CIITAP33076 1130 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 PPP2R2AP63151 447 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 IFT88Q13099 833 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 DCAF12L1Q5VU92 463 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 RINT1Q6NUQ1 792 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 TRIM51Q9BSJ1 452 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 FAM114A2Q9NRY5 505 aa19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 NOVA2Q9UNW9 492 aaKnown RBP19.91■□□□□ 0.78
PCDHA1-202ENST00000394633 MYH11P35749 1972 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 TRAPPC3O43617 180 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 FGGP02679 453 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 TMEM253P0C7T8 217 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 NMT1P30419 496 aaKnown RBP19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 PPATQ06203 517 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 DHX9Q08211 1270 aaKnown RBP19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 FBXO11Q86XK2 927 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 ATP8B4Q8TF62 1192 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 CEP89Q96ST8 783 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 SYT11Q9BT88 431 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 UTP11Q9Y3A2 253 aaKnown RBP19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 DCDC2CA8MYV0 355 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 H0YHG0 523 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 GAP43P17677 238 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 LMNB1P20700 586 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 PSMC2P35998 433 aaKnown RBP19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 MMP14P50281 582 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 DRAP1Q14919 205 aaPredicted RBP19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 DLGAP5Q15398 846 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 RFFLQ8WZ73 363 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 SYT17Q9BSW7 474 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 STK33Q9BYT3 514 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 GPR88Q9GZN0 384 aa19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 SCAF8Q9UPN6 1271 aaKnown RBP19.9■□□□□ 0.78
PCDHA1-202ENST00000394633 TCP10L2B9ZVM9 353 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 EIF3DO15371 548 aaKnown RBP eCLIP19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 FOSP01100 380 aaPredicted RBP19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 FMO5P49326 533 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 COG2Q14746 738 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 QPCTQ16769 361 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 NBPF9Q3BBW0 867 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 CERKLQ49MI3 558 aaPredicted RBP19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 ZC2HC1CQ53FD0 456 aaPredicted RBP19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 ODF2Q5BJF6 829 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 SWT1Q5T5J6 900 aaKnown RBP19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 PIGOQ8TEQ8 1089 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 DNAJC12Q9UKB3 198 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 ZNF541Q9H0D2 1346 aa19.89■□□□□ 0.77
PCDHA1-202ENST00000394633 FZD9O00144 591 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 OPLAHO14841 1288 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 HOXA13P31271 388 aaPredicted RBP19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 ACTN3Q08043 901 aaPredicted RBP19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 PLS1Q14651 629 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 NFIL3Q16649 462 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 KSR1Q8IVT5 923 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 CDAN1Q8IWY9 1227 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 C3orf20Q8ND61 904 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 ARHGEF26Q96DR7 871 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 TXLNGYQ9BZA5 131 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 TRIM31Q9BZY9 425 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 VCPKMTQ9H867 229 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 DDX20Q9UHI6 824 aaKnown RBP19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 FAM13AO94988 1023 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 ABCB4P21439 1286 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 PTENP60484 403 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 MAGOHP61326 146 aaKnown RBP19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 CTTNQ14247 550 aaKnown RBP19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 KRT71Q3SY84 523 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 SLC30A10Q6XR72 485 aa19.88■□□□□ 0.77
PCDHA1-202ENST00000394633 MYCT1Q8N699 235 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms