RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TRIM37O94972 964 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 FSBPO95073 299 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 RBM26Q5T8P6 1007 aaKnown RBP18.09■□□□□ 0.49
SIPA1-201ENST00000394224 ANKS4BQ8N8V4 417 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 LRRC57Q8N9N7 239 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 PBKQ96KB5 322 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 RPL21P46778 160 aaKnown RBP18.09■□□□□ 0.49
SIPA1-201ENST00000394224 CCDC137Q6PK04 289 aaKnown RBP18.09■□□□□ 0.49
SIPA1-201ENST00000394224 MICAL1Q8TDZ2 1067 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 TRIM7Q9C029 511 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 RNF14Q9UBS8 474 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 WDR91A4D1P6 747 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 CLDN3O15551 220 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
SIPA1-201ENST00000394224 SESN3P58005 492 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 GRAPQ13588 217 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 GRAPLQ8TC17 118 aaPredicted RBP18.09■□□□□ 0.49
SIPA1-201ENST00000394224 KIFC3Q9BVG8 833 aa18.09■□□□□ 0.49
SIPA1-201ENST00000394224 SPAG7O75391 227 aa18.08■□□□□ 0.49
SIPA1-201ENST00000394224 ZC3H12CQ9C0D7 883 aaKnown RBP18.08■□□□□ 0.49
SIPA1-201ENST00000394224 NARFQ9UHQ1 456 aa18.08■□□□□ 0.49
SIPA1-201ENST00000394224 USP54Q70EL1 1684 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 TOM1O60784 492 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 UBOX5O94941 541 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 ELF1P32519 619 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 ITIH3Q06033 890 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 NEDD9Q14511 834 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 KYNUQ16719 465 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 HS2ST1Q7LGA3 356 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 SRRM1Q8IYB3 904 aaKnown RBP18.08■□□□□ 0.48
SIPA1-201ENST00000394224 HAUS1Q96CS2 278 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 C9orf72Q96LT7 481 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 CEP63Q96MT8 703 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 EIF2AK1Q9BQI3 630 aaKnown RBP18.08■□□□□ 0.48
SIPA1-201ENST00000394224 VEZTQ9HBM0 779 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 TTC7AQ9ULT0 858 aaPredicted RBP18.08■□□□□ 0.48
SIPA1-201ENST00000394224 FRMD4BQ9Y2L6 1034 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.08■□□□□ 0.48
SIPA1-201ENST00000394224 KRT5P13647 590 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 SMTNP53814 917 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 SLC12A3P55017 1021 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 GRIPAP1Q4V328 841 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 ASPRV1Q53RT3 343 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 KAZNQ674X7 775 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 BARGINQ6ZT62 677 aa18.08■□□□□ 0.48
SIPA1-201ENST00000394224 RPUSD2Q8IZ73 545 aaKnown RBP18.08■□□□□ 0.48
SIPA1-201ENST00000394224 GEMIN8Q9NWZ8 242 aaKnown RBP18.08■□□□□ 0.48
SIPA1-201ENST00000394224 RASGRF2O14827 1237 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 GNA14O95837 355 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 COMTP21964 271 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 RPL13P26373 211 aaKnown RBP18.07■□□□□ 0.48
SIPA1-201ENST00000394224 ZNF449Q6P9G9 518 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 ERMNQ8TAM6 284 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 SAAL1Q96ER3 474 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 CYP26A1O43174 497 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 DIAPH2O60879 1101 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 EPHA7Q15375 998 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 PPP4R3AQ6IN85 833 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 CPXCR1Q8N123 301 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 DHX38Q92620 1227 aaKnown RBP18.07■□□□□ 0.48
SIPA1-201ENST00000394224 SGSM3Q96HU1 749 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 ERP44Q9BS26 406 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 PI4K2AQ9BTU6 479 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 NOD2Q9HC29 1040 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 AGAP1Q9UPQ3 857 aa18.07■□□□□ 0.48
SIPA1-201ENST00000394224 PYGMP11217 842 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 KIAA1755Q5JYT7 1200 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 PASD1Q8IV76 773 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 ALG13Q9NP73 1137 aaKnown RBP18.06■□□□□ 0.48
SIPA1-201ENST00000394224 PCDHA2Q9Y5H9 948 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 ASTN1O14525 1302 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 MSH4O15457 936 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 SPATA31C1P0DKV0 1188 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 SOX10P56693 466 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
SIPA1-201ENST00000394224 TTC27Q6P3X3 843 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 RFX8Q6ZV50 586 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 GPR75-ASB3A0A0A6YYF3 556 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 DRD4P21917 467 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 MYL7Q01449 175 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 PHLDB3Q6NSJ2 640 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 SUPT20HQ8NEM7 779 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 ACSF2Q96CM8 615 aaPredicted RBP18.06■□□□□ 0.48
SIPA1-201ENST00000394224 GPRC5CQ9NQ84 441 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 MYO3BQ8WXR4 1341 aa18.06■□□□□ 0.48
SIPA1-201ENST00000394224 SOX5P35711 763 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 CERKLQ49MI3 558 aaPredicted RBP18.05■□□□□ 0.48
SIPA1-201ENST00000394224 CERS5Q8N5B7 392 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 EMSYQ7Z589 1322 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 MYH3P11055 1940 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 K7ENM7 598 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 GJB6O95452 261 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 SGPL1O95470 568 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 HLA-DOAP06340 250 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 PSMC4P43686 418 aa18.05■□□□□ 0.48
SIPA1-201ENST00000394224 LRCH2Q5VUJ6 765 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms