RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
UBR4-203ENST00000375225 INTS8Q75QN2 995 aaKnown RBP13.31□□□□□ -0.28
UBR4-203ENST00000375225 CYP2W1Q8TAV3 490 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 TMEM174Q8WUU8 243 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 ACCSQ96QU6 501 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 LXNQ9BS40 222 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 LRRC1Q9BTT6 524 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 UNC45AQ9H3U1 944 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 ZCCHC17Q9NP64 241 aaKnown RBP13.31□□□□□ -0.28
UBR4-203ENST00000375225 MYH11P35749 1972 aa13.31□□□□□ -0.28
UBR4-203ENST00000375225 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
UBR4-203ENST00000375225 CCDC188H7C350 402 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 TGFB1I1O43294 461 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 DKC1O60832 514 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBR4-203ENST00000375225 CAPN2P17655 700 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 ACTN2P35609 894 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 SOX5P35711 763 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 MYL7Q01449 175 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 GHRHRQ02643 423 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 ENOX2Q16206 610 aaKnown RBP13.3□□□□□ -0.28
UBR4-203ENST00000375225 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 SND1Q7KZF4 910 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBR4-203ENST00000375225 ARMC9Q7Z3E5 817 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 ZNF571Q7Z3V5 609 aaPredicted RBP13.3□□□□□ -0.28
UBR4-203ENST00000375225 ANKRD13AQ8IZ07 590 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 FAM76AQ8TAV0 307 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 WHAMMQ8TF30 809 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 NAP1L3Q99457 506 aaPredicted RBP13.3□□□□□ -0.28
UBR4-203ENST00000375225 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
UBR4-203ENST00000375225 SUGCTQ9HAC7 445 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 EXOC7Q9UPT5 735 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 SNCAIPQ9Y6H5 919 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 RPTORQ8N122 1335 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 PTPRFP10586 1907 aa13.3□□□□□ -0.28
UBR4-203ENST00000375225 K7ENM7 598 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 MAPK13O15264 365 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 NCK2O43639 380 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 EXOC3O60645 756 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 KIF4AO95239 1232 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 LYPLA2O95372 231 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 ACTN1P12814 892 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 NMT1P30419 496 aaKnown RBP13.29□□□□□ -0.28
UBR4-203ENST00000375225 CXCR5P32302 372 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 ABCD1P33897 745 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 JAK3P52333 1124 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 HMGCS2P54868 508 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PCNX4Q63HM2 1172 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
UBR4-203ENST00000375225 USP37Q86T82 979 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 C12orf56Q8IXR9 622 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 ACTRT1Q8TDG2 376 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 DMAC2Q9NW81 257 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
UBR4-203ENST00000375225 SALL4Q9UJQ4 1053 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 AFG3L2Q9Y4W6 797 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 ZMYM2Q9UBW7 1377 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
UBR4-203ENST00000375225 ZBED4O75132 1171 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 HIP1RO75146 1068 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 RPS6KA5O75582 802 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 FTCDO95954 541 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 SFNP31947 248 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 CASP4P49662 377 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 BFSP1Q12934 665 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 CUL1Q13616 776 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PADI6Q6TGC4 694 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PEX26Q7Z412 305 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 RDM1Q8NG50 284 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
UBR4-203ENST00000375225 HVCN1Q96D96 273 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 PSMB7Q99436 277 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 FAM204AQ9H8W3 233 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 SIX2Q9NPC8 291 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
UBR4-203ENST00000375225 AMFRQ9UKV5 643 aa13.29□□□□□ -0.28
UBR4-203ENST00000375225 LOC285556D6RIA3 1793 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 GOLGA6CA6NDK9 693 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 SFI1A8K8P3 1242 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 TMCO5BA8MYB1 307 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 F8VZ95 297 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 KCNK3O14649 394 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 HEXIM1O94992 359 aaKnown RBP13.28□□□□□ -0.28
UBR4-203ENST00000375225 TMEM253P0C7T8 217 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 GOLGA6DP0CG33 693 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 ARP10275 920 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
UBR4-203ENST00000375225 CYP2J2P51589 502 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 PPATQ06203 517 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
UBR4-203ENST00000375225 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms