RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 MMTAG2Q9BU76 263 aaKnown RBP22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 KCNK9Q9NPC2 374 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 GRHL1Q9NZI5 618 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 CTNNAL1Q9UBT7 734 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 TRAF5O00463 557 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 LONRF1Q17RB8 773 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 DCAF12L1Q5VU92 463 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 SV2BQ7L1I2 683 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 VSIG1Q86XK7 387 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 AGGF1Q8N302 714 aaeCLIP22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 DTNBP1Q96EV8 351 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 TGS1Q96RS0 853 aaKnown RBP22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 GANQ9H2C0 597 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 NVLO15381 856 aaKnown RBP22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 CREB3O43889 395 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 SESN3P58005 492 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 CCDC15Q0P6D6 951 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 RCN2Q14257 317 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 CCNJLQ8IV13 435 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 AK8Q96MA6 479 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 TSG101Q99816 390 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 MPP2Q14168 576 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 TBC1D10AQ9BXI6 508 aa22.17■■□□□ 1.14
TMEFF1-201ENST00000374879 COL1A1P02452 1464 aaPredicted RBP22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 SIGLEC16A6NMB1 481 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 ACTN1P12814 892 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 EPHB2P29323 1055 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 DDB1Q16531 1140 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 ERP27Q96DN0 273 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 NDNQ99608 321 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 DENND2DQ9H6A0 471 aaPredicted RBP22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 CTTNBP2NLQ9P2B4 639 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 TTC7AQ9ULT0 858 aaPredicted RBP22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 CCDC88AQ3V6T2 1871 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 LAD1O00515 517 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 RPL21P46778 160 aaKnown RBP22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 CACNA2D1P54289 1103 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 MFSD5Q6N075 450 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 RBM12BQ8IXT5 1001 aaKnown RBP22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 PLEKHG4BQ96PX9 1271 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 AMFRQ9UKV5 643 aa22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 CICQ96RK0 1608 aaPredicted RBP22.16■■□□□ 1.14
TMEFF1-201ENST00000374879 FAM187AA6NFU0 413 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 GSTA2P09210 222 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 OR52Z1P0C646 297 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 GSTT1P30711 240 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 INTS8Q75QN2 995 aaKnown RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 NAP1L3Q99457 506 aaPredicted RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 DMAP1Q9NPF5 467 aaPredicted RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 BLOC1S4Q9NUP1 217 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 PDLIM1O00151 329 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 ATP9AO75110 1047 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 MAGEA8P43361 318 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 FKBP3Q00688 224 aaKnown RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 ZNF211Q13398 564 aaPredicted RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 BICDL1Q6ZP65 573 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 SYCP3Q8IZU3 236 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 SYCE1Q8N0S2 351 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 KIAA1683Q9H0B3 1180 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 ZWILCHQ9H900 591 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 ATP8A2Q9NTI2 1148 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 DNAAF2Q9NVR5 837 aaKnown RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 LRCH1Q9Y2L9 728 aa22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 BAZ2AQ9UIF9 1905 aaKnown RBP22.15■■□□□ 1.14
TMEFF1-201ENST00000374879 PVALEFA0A1B0GWK0 134 aa22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 DRG2P55039 364 aaKnown RBP22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 MAPK7Q13164 816 aa22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 PABPC1LQ4VXU2 614 aaKnown RBP22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 C3orf67Q6ZVT6 689 aa22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 SEC63Q9UGP8 760 aaKnown RBP22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 PHF24Q9UPV7 400 aa22.14■■□□□ 1.14
TMEFF1-201ENST00000374879 KCNA3P22001 575 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 SERPINB4P48594 390 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 ACVR2BQ13705 512 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 MYBPC3Q14896 1274 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 MTFR1Q15390 333 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 ZC2HC1CQ53FD0 456 aaPredicted RBP22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 WASHC2DQ5SRD0 308 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 SLC7A6OSQ96CW6 309 aaPredicted RBP22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 C18orf8Q96DM3 657 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 OSGEPQ9NPF4 335 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 PPP1R9AQ9ULJ8 1098 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 DUOX1Q9NRD9 1551 aa22.14■■□□□ 1.13
TMEFF1-201ENST00000374879 DDX3YO15523 660 aaKnown RBP22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 PSMC4P43686 418 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 EVX2Q03828 476 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 UBE4AQ14139 1066 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 ERFEQ4G0M1 354 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 OPTNQ96CV9 577 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 CALML4Q96GE6 196 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 RIC8AQ9NPQ8 531 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 ZNF652Q9Y2D9 606 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 USP20Q9Y2K6 914 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 ATP5HO75947 161 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 H2AFZP0C0S5 128 aa22.13■■□□□ 1.13
TMEFF1-201ENST00000374879 KRT13P13646 458 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms