RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 PTPN14Q15678 1187 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 DCAF17Q5H9S7 520 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-202ENST00000372405 CYP26C1Q6V0L0 522 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 TAS1R3Q7RTX0 852 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 MAP4K3Q8IVH8 894 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 C12orf56Q8IXR9 622 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 SLC17A8Q8NDX2 589 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 ATRIPQ8WXE1 791 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 MAML3Q96JK9 1138 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 PCIF1Q9H4Z3 704 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-202ENST00000372405 R3HCC1Q9Y3T6 440 aaKnown RBP15.1■□□□□ 0.01
PTPRF-202ENST00000372405 ADGRG1Q9Y653 693 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 EMSYQ7Z589 1322 aa15.1■□□□□ 0.01
PTPRF-202ENST00000372405 RBM47A0AV96 593 aaKnown RBP15.09■□□□□ 0.01
PTPRF-202ENST00000372405 ANKRD63C9JTQ0 380 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 NOP56O00567 594 aaKnown RBP15.09■□□□□ 0.01
PTPRF-202ENST00000372405 AFPP02771 609 aaKnown RBP15.09■□□□□ 0.01
PTPRF-202ENST00000372405 SLC10A3P09131 477 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 MARK3P27448 753 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 ADSSP30520 456 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 MAPK4P31152 587 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 ARL2P36404 184 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 SMTNP53814 917 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 MYBPC2Q14324 1141 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 SLC39A4Q6P5W5 647 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 DPP9Q86TI2 863 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 NPLOC4Q8TAT6 608 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 ASAP3Q8TDY4 903 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 IQCDQ96DY2 449 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 LSM14BQ9BX40 385 aaKnown RBP15.09■□□□□ 0.01
PTPRF-202ENST00000372405 VTA1Q9NP79 307 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 ARHGAP28Q9P2N2 729 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 PCNTO95613 3336 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 FAM155AB1AL88 458 aaPredicted RBP15.09■□□□□ 0.01
PTPRF-202ENST00000372405 GLRA2P23416 452 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 HNRNPH3P31942 346 aaKnown RBP15.09■□□□□ 0.01
PTPRF-202ENST00000372405 DRP2Q13474 957 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 TCERG1LQ5VWI1 586 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 PLPPR4Q7Z2D5 763 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 NEK11Q8NG66 645 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 GLG1Q92896 1179 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 HVCN1Q96D96 273 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 AZI2Q9H6S1 392 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 NRBP2Q9NSY0 501 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 FRMD4BQ9Y2L6 1034 aa15.09■□□□□ 0.01
PTPRF-202ENST00000372405 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.08■□□□□ 0
PTPRF-202ENST00000372405 EXOC3O60645 756 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0
PTPRF-202ENST00000372405 SLC9A1P19634 815 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 ADCYAP1R1P41586 468 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 PLCB4Q15147 1175 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 TAF1CQ15572 869 aaPredicted RBP15.08■□□□□ 0
PTPRF-202ENST00000372405 IFNL1Q8IU54 200 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 RDH13Q8NBN7 331 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 ACRBPQ8NEB7 543 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 SLC7A3Q8WY07 619 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 GANQ9H2C0 597 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 ZCCHC17Q9NP64 241 aaKnown RBP15.08■□□□□ 0
PTPRF-202ENST00000372405 HSPBP1Q9NZL4 362 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0
PTPRF-202ENST00000372405 PLAGL2Q9UPG8 496 aa15.08■□□□□ 0
PTPRF-202ENST00000372405 SLC15A5A6NIM6 579 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 LRRC53A6NM62 1247 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 CCP110O43303 1012 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 ZSCAN12O43309 604 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 MAFO75444 373 aaPredicted RBP15.07■□□□□ 0
PTPRF-202ENST00000372405 TRIM49P0CI25 452 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 TRIM49CP0CI26 452 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 ACTN1P12814 892 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 RFC5P40937 340 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 MORN1Q5T089 497 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 TRIM65Q6PJ69 517 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 ATP8B4Q8TF62 1192 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 BBXQ8WY36 941 aaPredicted RBP15.07■□□□□ 0
PTPRF-202ENST00000372405 EDEM3Q9BZQ6 932 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 REXO2Q9Y3B8 237 aaKnown RBP15.07■□□□□ 0
PTPRF-202ENST00000372405 TLL2Q9Y6L7 1015 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 FANCGO15287 622 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 PLEKP08567 350 aaPredicted RBP15.07■□□□□ 0
PTPRF-202ENST00000372405 CCDC175P0C221 793 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 PON1P27169 355 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 CNGA1P29973 690 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 BFSP1Q12934 665 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
PTPRF-202ENST00000372405 PDXDC1Q6P996 788 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 C17orf99Q6UX52 265 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 RRAGAQ7L523 313 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 ZNF397Q8NF99 534 aaPredicted RBP15.07■□□□□ 0
PTPRF-202ENST00000372405 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 FAM167AQ96KS9 214 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 IFT74Q96LB3 600 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 TINF2Q9BSI4 451 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 SIX2Q9NPC8 291 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 NLRC4Q9NPP4 1024 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 CEP72Q9P209 647 aa15.07■□□□□ 0
PTPRF-202ENST00000372405 ADCY6O43306 1168 aa15.06■□□□□ 0
PTPRF-202ENST00000372405 POLR2FP61218 127 aaKnown RBP15.06■□□□□ 0
PTPRF-202ENST00000372405 SNRPFP62306 86 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms