RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ARL6IP4Q66PJ3 421 aaKnown RBP22.29■■□□□ 1.16
TMEM53-205ENST00000372244 ATP6V0A4Q9HBG4 840 aa22.29■■□□□ 1.16
TMEM53-205ENST00000372244 BMP2KQ9NSY1 1161 aaPredicted RBP22.29■■□□□ 1.16
TMEM53-205ENST00000372244 MTUS1Q9ULD2 1270 aa22.29■■□□□ 1.16
TMEM53-205ENST00000372244 ADGRA3Q8IWK6 1321 aa22.29■■□□□ 1.16
TMEM53-205ENST00000372244 SFPQP23246 707 aaKnown RBP eCLIP22.28■■□□□ 1.16
TMEM53-205ENST00000372244 CCT6AP40227 531 aaKnown RBP22.28■■□□□ 1.16
TMEM53-205ENST00000372244 SRGAP1Q7Z6B7 1085 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 TMEM192Q8IY95 271 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 CMTR2Q8IYT2 770 aaKnown RBP22.28■■□□□ 1.16
TMEM53-205ENST00000372244 TRAIPQ9BWF2 469 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 MINDY3Q9H8M7 445 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 TMEM161AQ9NX61 479 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 LMCD1Q9NZU5 365 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 LRFN2Q9ULH4 789 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 A0A0U1RQF3 1178 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 BTG3Q14201 252 aaPredicted RBP22.28■■□□□ 1.16
TMEM53-205ENST00000372244 RNF149Q8NC42 400 aa22.28■■□□□ 1.16
TMEM53-205ENST00000372244 MMTAG2Q9BU76 263 aaKnown RBP22.28■■□□□ 1.16
TMEM53-205ENST00000372244 VPS37CA5D8V6 355 aaPredicted RBP22.27■■□□□ 1.16
TMEM53-205ENST00000372244 C5orf67F2Z3F1 127 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 CDC25AP30304 524 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 BMPR1AP36894 532 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 FAM102BQ5T8I3 360 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 IFNLR1Q8IU57 520 aaPredicted RBP22.27■■□□□ 1.16
TMEM53-205ENST00000372244 FBXO22Q8NEZ5 403 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 CCDC43Q96MW1 224 aaKnown RBP22.27■■□□□ 1.16
TMEM53-205ENST00000372244 DACT1Q9NYF0 836 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 KIAA1024Q9UPX6 916 aa22.27■■□□□ 1.16
TMEM53-205ENST00000372244 SPTBN5Q9NRC6 3674 aaKnown RBP22.26■■□□□ 1.15
TMEM53-205ENST00000372244 UNC80Q8N2C7 3258 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 PP2D1A8MPX8 630 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 H3BNC9 293 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 PTENP60484 403 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 KRT79Q5XKE5 535 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 ZNF598Q86UK7 904 aaKnown RBP22.26■■□□□ 1.15
TMEM53-205ENST00000372244 ECHDC2Q86YB7 292 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 MCPH1Q8NEM0 835 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 ASAP3Q8TDY4 903 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 SNX29Q8TEQ0 813 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 GDPD5Q8WTR4 605 aa22.26■■□□□ 1.15
TMEM53-205ENST00000372244 GTPBP6O43824 516 aaPredicted RBP22.25■■□□□ 1.15
TMEM53-205ENST00000372244 EOMESO95936 686 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 RB1P06400 928 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 CYP11B2P19099 503 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 GLRA2P23416 452 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 HOXA11P31270 313 aaPredicted RBP22.25■■□□□ 1.15
TMEM53-205ENST00000372244 GATMP50440 423 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 PCBP1Q15365 356 aaKnown RBP eCLIP22.25■■□□□ 1.15
TMEM53-205ENST00000372244 PADI6Q6TGC4 694 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 CATSPER4Q7RTX7 472 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 NFKBIZQ9BYH8 718 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 FOXD4L1Q9NU39 408 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 MTMR6Q9Y217 621 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 RWDD3Q9Y3V2 267 aa22.25■■□□□ 1.15
TMEM53-205ENST00000372244 MRPL42Q9Y6G3 142 aaKnown RBP22.25■■□□□ 1.15
TMEM53-205ENST00000372244 USO1O60763 962 aaKnown RBP22.24■■□□□ 1.15
TMEM53-205ENST00000372244 BMP15O95972 392 aa22.24■■□□□ 1.15
TMEM53-205ENST00000372244 RESTQ13127 1097 aa22.24■■□□□ 1.15
TMEM53-205ENST00000372244 HYIQ5T013 277 aa22.24■■□□□ 1.15
TMEM53-205ENST00000372244 SLC17A8Q8NDX2 589 aa22.24■■□□□ 1.15
TMEM53-205ENST00000372244 BHMT2Q9H2M3 363 aa22.24■■□□□ 1.15
TMEM53-205ENST00000372244 DDX19AQ9NUU7 478 aaKnown RBP22.24■■□□□ 1.15
TMEM53-205ENST00000372244 RNF19AQ9NV58 838 aa22.24■■□□□ 1.15
TMEM53-205ENST00000372244 ARHGEF35A5YM69 484 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 ZNF623O75123 536 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 FGFR1P11362 822 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 ATF7P17544 494 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-205ENST00000372244 PHKA2P46019 1235 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 CAPSQ13938 189 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 TFDP1Q14186 410 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 CCDC85BQ15834 202 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-205ENST00000372244 KCTD17Q8N5Z5 321 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 PLVAPQ9BX97 442 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 POLR3FQ9H1D9 316 aaPredicted RBP22.23■■□□□ 1.15
TMEM53-205ENST00000372244 GPRC5CQ9NQ84 441 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 AGPAT5Q9NUQ2 364 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 DNM3Q9UQ16 869 aa22.23■■□□□ 1.15
TMEM53-205ENST00000372244 VWA3AA6NCI4 1184 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 STX6O43752 255 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 IBSPP21815 317 aaPredicted RBP22.22■■□□□ 1.15
TMEM53-205ENST00000372244 SF3A1Q15459 793 aaKnown RBP22.22■■□□□ 1.15
TMEM53-205ENST00000372244 CASD1Q96PB1 797 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 PIN4Q9Y237 131 aaKnown RBP22.22■■□□□ 1.15
TMEM53-205ENST00000372244 ARID2Q68CP9 1835 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 TBKBP1A7MCY6 615 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 EYA4O95677 639 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 GPM6BQ13491 265 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 PAN2Q504Q3 1202 aaKnown RBP22.22■■□□□ 1.15
TMEM53-205ENST00000372244 TWF2Q6IBS0 349 aaKnown RBP22.22■■□□□ 1.15
TMEM53-205ENST00000372244 MAEAQ7L5Y9 396 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 HSCBQ8IWL3 235 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 PPM1EQ8WY54 764 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 AK8Q96MA6 479 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 TMEM117Q9H0C3 514 aa22.22■■□□□ 1.15
TMEM53-205ENST00000372244 E9PMD0 336 aa22.21■■□□□ 1.15
TMEM53-205ENST00000372244 HOXA2O43364 376 aa22.21■■□□□ 1.15
TMEM53-205ENST00000372244 SKIP12755 728 aa22.21■■□□□ 1.15
TMEM53-205ENST00000372244 CTNNB1P35222 781 aa22.21■■□□□ 1.15
TMEM53-205ENST00000372244 MBTD1Q05BQ5 628 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms