RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 THAP2Q9H0W7 228 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 ISCUQ9H1K1 167 aa18.91■□□□□ 0.62
COL9A1-201ENST00000320755 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-201ENST00000320755 GRIN2DO15399 1336 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 GTPBP10A4D1E9 387 aaKnown RBP18.9■□□□□ 0.62
COL9A1-201ENST00000320755 EBAG9O00559 213 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 VIL1P09327 827 aaKnown RBP18.9■□□□□ 0.62
COL9A1-201ENST00000320755 GCLMP48507 274 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 MIER3Q7Z3K6 550 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 SLC20A1Q8WUM9 679 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 APEX2Q9UBZ4 518 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 FBXL5Q9UKA1 691 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 ITGB5P18084 799 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 SYCE1Q8N0S2 351 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 DAW1Q8N136 415 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 IL31RAQ8NI17 732 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 FRMPD4Q14CM0 1322 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 EMSYQ7Z589 1322 aa18.9■□□□□ 0.62
COL9A1-201ENST00000320755 NDUFAB1O14561 156 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 LMNB1P20700 586 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 HSD17B3P37058 310 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 STYK1Q6J9G0 422 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 ELMO3Q96BJ8 720 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 TRIM51Q9BSJ1 452 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 VCPKMTQ9H867 229 aa18.89■□□□□ 0.62
COL9A1-201ENST00000320755 SUCLA2Q9P2R7 463 aaPredicted RBP18.89■□□□□ 0.62
COL9A1-201ENST00000320755 GOLGA8IPA6NC78 632 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 GOLGA8JA6NMD2 632 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 KRT13P13646 458 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 CTNNA1P35221 906 aaKnown RBP18.89■□□□□ 0.61
COL9A1-201ENST00000320755 BFSP1Q12934 665 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 DGKZQ13574 1117 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 SLC30A5Q8TAD4 765 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 CBWD1Q9BRT8 395 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 KCNH7Q9NS40 1196 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 TMOD4Q9NZQ9 345 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 GOLGA6L10A6NI86 522 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 NFIBO00712 420 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 NR1D1P20393 614 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 AADACL2Q6P093 401 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 GPR88Q9GZN0 384 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 RANBP17Q9H2T7 1088 aaKnown RBP18.89■□□□□ 0.61
COL9A1-201ENST00000320755 ACP6Q9NPH0 428 aa18.89■□□□□ 0.61
COL9A1-201ENST00000320755 TRAF1Q13077 416 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
COL9A1-201ENST00000320755 COL20A1Q9P218 1284 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 NENFQ9UMX5 172 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 STXBP5LQ9Y2K9 1186 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 ECHS1P30084 290 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 INPP5BP32019 993 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 LLGL1Q15334 1064 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 SLFN11Q7Z7L1 901 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 RFFLQ8WZ73 363 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 MKNK1Q9BUB5 465 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 TSPYL1Q9H0U9 437 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 SEL1LQ9UBV2 794 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 MYH11P35749 1972 aa18.88■□□□□ 0.61
COL9A1-201ENST00000320755 ALAS1P13196 640 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ZNF131P52739 623 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 SEC24CP53992 1094 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 LARGE2Q8N3Y3 721 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 FLAD1Q8NFF5 587 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 KAT5Q92993 513 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 MXRA8Q9BRK3 442 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 GPRC5CQ9NQ84 441 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 DMAC2Q9NW81 257 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 CORO7P57737 925 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 MAPK7Q13164 816 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ODF2Q5BJF6 829 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ARHGEF19Q8IW93 802 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 OLIG1Q8TAK6 271 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 FAM151AQ8WW52 585 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 HES6Q96HZ4 224 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ATP6V1G3Q96LB4 118 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 CTTNBP2NLQ9P2B4 639 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ODF2LQ9ULJ1 636 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 CES2O00748 559 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ZBTB48P10074 688 aaPredicted RBP18.87■□□□□ 0.61
COL9A1-201ENST00000320755 HSPA9P38646 679 aaKnown RBP18.87■□□□□ 0.61
COL9A1-201ENST00000320755 PPP3CAQ08209 521 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 UAP1Q16222 522 aaPredicted RBP18.87■□□□□ 0.61
COL9A1-201ENST00000320755 MREGQ8N565 214 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 CCDC26Q8TAB7 109 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 GLG1Q92896 1179 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 COG5Q9UP83 839 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 ZHX2Q9Y6X8 837 aa18.87■□□□□ 0.61
COL9A1-201ENST00000320755 A0A0A6YYK5 440 aaPredicted RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 CUL1Q13616 776 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 C7orf43Q8WVR3 580 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 ZNF341Q9BYN7 854 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 LARSQ9P2J5 1176 aaKnown RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 FAM169AQ9Y6X4 670 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 ATAD5Q96QE3 1844 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 FTLP02792 175 aaPredicted RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 TMEM253P0C7T8 217 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms