RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Bcs1lQ9CZP5 418 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Col11a1Q61245 1804 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Capza3P70190 299 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Slc7a6osQ7TPE5 306 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Mcph1Q7TT79 822 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Acad11Q80XL6 779 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Rapgef5Q8C0Q9 814 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Q91Z58 1206 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tmem132aQ922P8 1018 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Irf8P23611 424 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Trappc3lQ4KL14 181 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 MmeQ61391 750 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gpt2Q8BGT5 522 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tmem161bQ8C2L6 487 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Syne4Q8CII8 388 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Il31raQ8K5B1 716 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Fgd4Q91ZT5 766 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ubxn6Q99PL6 442 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Cfap53Q9D439 514 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Olr1Q9EQ09 363 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Cnga3Q9JJZ8 631 aa17.27■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gm1758F6VZZ1 202 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Kcnu1O54982 1121 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ece1Q4PZA2 769 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Sh3d21Q7TSG5 549 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Entpd3Q8BFW6 529 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Leng8Q8CBY3 785 aaKnown RBP17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Krt222Q8CCX5 294 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Trip11E9Q512 1976 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 AdssP46664 456 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 MafbP54841 323 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Muc3aQ3U5A2 218 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Pacsin1Q61644 441 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Dact1Q8R4A3 778 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Nrbp2Q91V36 499 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Exoc3l2D3YUP5 789 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gm21973F6WEZ7 68 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Tnnt2P50752 301 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Serpinb3dQ6UKZ0 387 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 TbckQ8BM85 762 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Bpifb6Q8BU51 449 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 PdxkQ8K183 312 aa17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Syf2Q9D198 242 aaKnown RBP17.26■□□□□ 0.35
Trim39-203ENSMUST00000113706 Oog4Q4G0C7 502 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ints8Q80V86 995 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Iws1Q8C1D8 766 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Grtp1Q9D3N8 359 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Cse1lQ9ERK4 971 aaKnown RBP17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Hyou1Q9JKR6 999 aaKnown RBP17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Nudt5Q9JKX6 218 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Celf5D3Z4T1 395 aaKnown RBP17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Hmgcs2P54869 508 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Cyp3a11Q64459 504 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Moxd2Q7TT41 619 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Fam83aQ8K2P2 436 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Cbwd1Q8VEH6 393 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Traf7Q922B6 594 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Mageb16Q9CWV4 363 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Atad5Q4QY64 1826 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Mov10P23249 1004 aaKnown RBP17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ppp3caP63328 521 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Edem3Q2HXL6 931 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Kmt5aQ2YDW7 349 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gpr162Q3UN16 588 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Capn13Q3UW68 665 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Srd5a1Q68FF9 255 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Polr3fQ921X6 316 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Prc1Q99K43 603 aaKnown RBP17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Sdr42e1Q9D665 394 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Plod3Q9R0E1 741 aa17.25■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gjd2O54851 321 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Prom1O54990 867 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gjb6P70689 261 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Q8BGN9 141 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Q9CYI0 393 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Timm44O35857 452 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 MafgO54790 162 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Calb1P12658 261 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Pla2g4aP47713 748 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Cyp11b1Q3TG86 501 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Sema5bQ60519 1093 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Dusp19Q8K4T5 220 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Rpn1Q91YQ5 608 aaKnown RBP17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Emc2Q9CRD2 297 aa17.24■□□□□ 0.35
Trim39-203ENSMUST00000113706 Col24a1Q30D77 1733 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Adgrf5G5E8Q8 1348 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Astn1Q61137 1302 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Gm45261A0A1B0GSP6 197 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 B020004C17RikJ3QP07 232 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Cd44P15379 778 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ces1eQ64176 562 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Styk1Q6J9G1 429 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Lmo3Q8BZL8 145 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Ccdc73Q8CDM4 1066 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 IntS13Q8QZV7 732 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Apba3O88888 571 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Wnt7bP28047 349 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 SnrpfP62307 86 aaKnown RBP17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 A1cfQ5YD48 595 aa17.23■□□□□ 0.35
Trim39-203ENSMUST00000113706 Klra6Q60653 266 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms