RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W FRT1Q99332 602 aa8.49□□□□□ -1.05
CIT3YPR001W MAD1P40957 749 aa8.48□□□□□ -1.05
CIT3YPR001W RPN4Q03465 531 aa8.48□□□□□ -1.05
CIT3YPR001W PIB1Q06651 286 aa8.48□□□□□ -1.05
CIT3YPR001W FUR4P05316 633 aaKnown RBP8.47□□□□□ -1.05
CIT3YPR001W STI1P15705 589 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
CIT3YPR001W SLY41P22215 453 aa8.47□□□□□ -1.05
CIT3YPR001W GLO3P38682 493 aaKnown RBP8.47□□□□□ -1.05
CIT3YPR001W PHO87P25360 923 aa8.46□□□□□ -1.05
CIT3YPR001W QDR1P40475 563 aa8.46□□□□□ -1.05
CIT3YPR001W NOP2P40991 618 aaKnown RBP8.46□□□□□ -1.05
CIT3YPR001W VPS16Q03308 798 aa8.46□□□□□ -1.05
CIT3YPR001W PIN2Q12057 282 aa8.46□□□□□ -1.05
CIT3YPR001W RPP1BP10622 106 aaKnown RBP8.45□□□□□ -1.06
CIT3YPR001W YGL081WP53156 320 aa8.45□□□□□ -1.06
CIT3YPR001W WRS1Q12109 432 aaKnown RBP8.45□□□□□ -1.06
CIT3YPR001W SSF2Q12153 453 aaPredicted RBP8.45□□□□□ -1.06
CIT3YPR001W SRS2P12954 1174 aa8.45□□□□□ -1.06
CIT3YPR001W HAP4P14064 554 aa8.44□□□□□ -1.06
CIT3YPR001W CLN2P20438 545 aa8.44□□□□□ -1.06
CIT3YPR001W GRX4P32642 244 aa8.44□□□□□ -1.06
CIT3YPR001W BUD6P41697 788 aa8.44□□□□□ -1.06
CIT3YPR001W ISF1P32488 338 aa8.43□□□□□ -1.06
CIT3YPR001W PBP2P38151 413 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
CIT3YPR001W PMC1P38929 1173 aaPredicted RBP8.43□□□□□ -1.06
CIT3YPR001W ZDS1P50111 915 aaKnown RBP8.43□□□□□ -1.06
CIT3YPR001W MDG1P53885 366 aa8.43□□□□□ -1.06
CIT3YPR001W NST1P53935 1240 aa8.43□□□□□ -1.06
CIT3YPR001W PUN1Q06991 263 aa8.43□□□□□ -1.06
CIT3YPR001W YOL057WQ08225 711 aa8.43□□□□□ -1.06
CIT3YPR001W SAM3Q08986 587 aa8.43□□□□□ -1.06
CIT3YPR001W TFB4Q12004 338 aa8.43□□□□□ -1.06
CIT3YPR001W CDC53Q12018 815 aaKnown RBP8.43□□□□□ -1.06
CIT3YPR001W YGR161W-CQ3E744 92 aa8.43□□□□□ -1.06
CIT3YPR001W GYP5Q12344 894 aa8.42□□□□□ -1.06
CIT3YPR001W YOR131CQ12486 218 aa8.42□□□□□ -1.06
CIT3YPR001W SPT2P06843 333 aaPredicted RBP8.41□□□□□ -1.06
CIT3YPR001W MIP1P15801 1254 aa8.41□□□□□ -1.06
CIT3YPR001W EMP47P43555 445 aa8.41□□□□□ -1.06
CIT3YPR001W ROM1P53046 1155 aa8.41□□□□□ -1.06
CIT3YPR001W RMD1Q03441 430 aa8.41□□□□□ -1.06
CIT3YPR001W TRM1P15565 570 aaKnown RBP8.4□□□□□ -1.06
CIT3YPR001W NSR1P27476 414 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
CIT3YPR001W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
CIT3YPR001W ACS2P52910 683 aaKnown RBP8.4□□□□□ -1.06
CIT3YPR001W MNN1P39106 762 aa8.39□□□□□ -1.07
CIT3YPR001W SPR28Q04921 423 aa8.39□□□□□ -1.07
CIT3YPR001W MCM2P29469 868 aa8.38□□□□□ -1.07
CIT3YPR001W AI4P03878 556 aa8.38□□□□□ -1.07
CIT3YPR001W ATG3P40344 310 aa8.38□□□□□ -1.07
CIT3YPR001W RTF1P53064 558 aa8.38□□□□□ -1.07
CIT3YPR001W YNL115CP53925 644 aa8.38□□□□□ -1.07
CIT3YPR001W BDF2Q07442 638 aa8.38□□□□□ -1.07
CIT3YPR001W GAS4Q08271 471 aa8.38□□□□□ -1.07
CIT3YPR001W MPH3P0CE00 602 aa8.37□□□□□ -1.07
CIT3YPR001W ILV3P39522 585 aaKnown RBP8.37□□□□□ -1.07
CIT3YPR001W YAP5P40574 245 aa8.37□□□□□ -1.07
CIT3YPR001W YJR142WP47173 342 aa8.37□□□□□ -1.07
CIT3YPR001W YOL036WQ08206 761 aa8.37□□□□□ -1.07
CIT3YPR001W MET6P05694 767 aaKnown RBP8.36□□□□□ -1.07
CIT3YPR001W RPT1P33299 467 aaKnown RBP8.36□□□□□ -1.07
CIT3YPR001W RTT106P40161 455 aa8.36□□□□□ -1.07
CIT3YPR001W PEX21P50091 288 aa8.36□□□□□ -1.07
CIT3YPR001W PUS6P53294 404 aa8.36□□□□□ -1.07
CIT3YPR001W UTP14Q04500 899 aaKnown RBP8.36□□□□□ -1.07
CIT3YPR001W ESF1Q06344 628 aaKnown RBP8.35□□□□□ -1.07
CIT3YPR001W SLI15P38283 698 aa8.34□□□□□ -1.07
CIT3YPR001W TUM1Q08686 304 aaKnown RBP8.34□□□□□ -1.07
CIT3YPR001W PHO4P07270 312 aaKnown RBP8.33□□□□□ -1.08
CIT3YPR001W VAN1P23642 535 aa8.33□□□□□ -1.08
CIT3YPR001W PEP7P32609 515 aa8.33□□□□□ -1.08
CIT3YPR001W SPR3P41901 512 aa8.33□□□□□ -1.08
CIT3YPR001W TRS120Q04183 1289 aa8.33□□□□□ -1.08
CIT3YPR001W LSO1Q3E827 93 aa8.33□□□□□ -1.08
CIT3YPR001W YGL015CP33199 130 aa8.32□□□□□ -1.08
CIT3YPR001W GRX7P38068 203 aa8.32□□□□□ -1.08
CIT3YPR001W MSH4P40965 878 aaPredicted RBP8.32□□□□□ -1.08
CIT3YPR001W TSC13Q99190 310 aa8.32□□□□□ -1.08
CIT3YPR001W UBP12P39538 1254 aa8.32□□□□□ -1.08
CIT3YPR001W YDL121CQ07541 149 aa8.32□□□□□ -1.08
CIT3YPR001W FRA1Q07825 749 aa8.32□□□□□ -1.08
CIT3YPR001W TRS33Q99394 268 aa8.32□□□□□ -1.08
CIT3YPR001W MNR2P35724 969 aa8.31□□□□□ -1.08
CIT3YPR001W DCW1P36091 449 aa8.31□□□□□ -1.08
CIT3YPR001W CWC24P53769 259 aa8.31□□□□□ -1.08
CIT3YPR001W STE20Q03497 939 aaKnown RBP8.31□□□□□ -1.08
CIT3YPR001W UTP13Q05946 817 aaKnown RBP8.31□□□□□ -1.08
CIT3YPR001W CDC73Q06697 393 aa8.31□□□□□ -1.08
CIT3YPR001W GPI13Q07830 1017 aa8.31□□□□□ -1.08
CIT3YPR001W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
CIT3YPR001W TBF1Q02457 562 aa8.3□□□□□ -1.08
CIT3YPR001W SOH1P38633 127 aa8.29□□□□□ -1.08
CIT3YPR001W NUP82P40368 713 aa8.29□□□□□ -1.08
CIT3YPR001W DAK2P43550 591 aa8.29□□□□□ -1.08
CIT3YPR001W MTO1P53070 669 aa8.29□□□□□ -1.08
CIT3YPR001W KAR1P11927 433 aa8.28□□□□□ -1.08
CIT3YPR001W GCD6P32501 712 aaKnown RBP8.28□□□□□ -1.08
CIT3YPR001W PET112P33893 541 aa8.28□□□□□ -1.08
CIT3YPR001W RPS26AP39938 119 aaKnown RBP8.28□□□□□ -1.08
CIT3YPR001W RPS26BP39939 119 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms