RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W NUP145P49687 1317 aa10.78□□□□□ -0.68
AMF1YOR378W YRB30P53107 440 aaPredicted RBP10.78□□□□□ -0.68
AMF1YOR378W ATG13Q06628 738 aa10.78□□□□□ -0.68
AMF1YOR378W RTT109Q07794 436 aa10.78□□□□□ -0.68
AMF1YOR378W OSM1P21375 501 aaKnown RBP10.77□□□□□ -0.69
AMF1YOR378W HEF3P53978 1044 aaKnown RBP10.77□□□□□ -0.69
AMF1YOR378W RVB2Q12464 471 aaKnown RBP10.77□□□□□ -0.69
AMF1YOR378W COBP00163 385 aa10.76□□□□□ -0.69
AMF1YOR378W KCC4P25389 1037 aa10.76□□□□□ -0.69
AMF1YOR378W MAM1P40065 302 aa10.76□□□□□ -0.69
AMF1YOR378W ZDS1P50111 915 aaKnown RBP10.76□□□□□ -0.69
AMF1YOR378W LAM6Q08001 693 aa10.75□□□□□ -0.69
AMF1YOR378W UGA3P26370 528 aa10.74□□□□□ -0.69
AMF1YOR378W RPN11P43588 306 aaKnown RBP10.74□□□□□ -0.69
AMF1YOR378W GYP7P48365 746 aa10.74□□□□□ -0.69
AMF1YOR378W EDE1P34216 1381 aa10.73□□□□□ -0.69
AMF1YOR378W YKR075CP36155 307 aa10.73□□□□□ -0.69
AMF1YOR378W YJL181WP46987 611 aa10.73□□□□□ -0.69
AMF1YOR378W NSE3Q05541 303 aa10.73□□□□□ -0.69
AMF1YOR378W PRP40P33203 583 aaKnown RBP10.72□□□□□ -0.69
AMF1YOR378W RRT14P40470 206 aa10.72□□□□□ -0.69
AMF1YOR378W YBP2P53169 641 aa10.72□□□□□ -0.69
AMF1YOR378W UBP1P25037 809 aa10.7□□□□□ -0.7
AMF1YOR378W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.69□□□□□ -0.7not detected
AMF1YOR378W BMS1Q08965 1183 aaKnown RBP10.69□□□□□ -0.7
AMF1YOR378W YFR016CP43597 1233 aaKnown RBP10.68□□□□□ -0.7
AMF1YOR378W BUD31P25337 157 aaPredicted RBP10.68□□□□□ -0.7
AMF1YOR378W LYS2P07702 1392 aa10.68□□□□□ -0.7
AMF1YOR378W GRX1P25373 110 aaKnown RBP10.67□□□□□ -0.7
AMF1YOR378W ALE1Q08548 619 aa10.67□□□□□ -0.7
AMF1YOR378W MAK21Q12176 1025 aaKnown RBP10.67□□□□□ -0.7
AMF1YOR378W COQ4O13525 335 aa10.66□□□□□ -0.7
AMF1YOR378W NPR2P39923 615 aa10.66□□□□□ -0.7
AMF1YOR378W RMT2Q03305 412 aa10.66□□□□□ -0.7
AMF1YOR378W YBR287WP38355 427 aa10.65□□□□□ -0.7
AMF1YOR378W SRT1Q03175 343 aa10.64□□□□□ -0.71
AMF1YOR378W TUM1Q08686 304 aaKnown RBP10.63□□□□□ -0.71
AMF1YOR378W MSB4Q12317 492 aa10.63□□□□□ -0.71
AMF1YOR378W RAD2P07276 1031 aa10.62□□□□□ -0.71
AMF1YOR378W RAD4P14736 754 aa10.62□□□□□ -0.71
AMF1YOR378W YOL057WQ08225 711 aa10.62□□□□□ -0.71
AMF1YOR378W NOP53Q12080 455 aaKnown RBP10.62□□□□□ -0.71
AMF1YOR378W FUN12P39730 1002 aaKnown RBP10.61□□□□□ -0.71
AMF1YOR378W YIL092WP40497 633 aa10.61□□□□□ -0.71
AMF1YOR378W BUD27P43573 796 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71not detected
AMF1YOR378W MDG1P53885 366 aa10.6□□□□□ -0.71
AMF1YOR378W DAL5P15365 543 aa10.59□□□□□ -0.71
AMF1YOR378W SSP2Q08646 371 aa10.59□□□□□ -0.71
AMF1YOR378W RIM15P43565 1770 aa10.59□□□□□ -0.71
AMF1YOR378W PRI1P10363 409 aa10.58□□□□□ -0.72
AMF1YOR378W LYS4P49367 693 aaPredicted RBP10.58□□□□□ -0.72
AMF1YOR378W GRE2Q12068 342 aaKnown RBP10.57□□□□□ -0.72
AMF1YOR378W PHM7Q12252 991 aa10.57□□□□□ -0.72
AMF1YOR378W YPP1P46951 817 aa10.56□□□□□ -0.72
AMF1YOR378W ZDS2P54786 942 aa10.55□□□□□ -0.72
AMF1YOR378W DNM1P54861 757 aa10.55□□□□□ -0.72
AMF1YOR378W MRP7P12687 371 aa10.54□□□□□ -0.72
AMF1YOR378W GTT3P39996 337 aa10.54□□□□□ -0.72
AMF1YOR378W YDR306CQ06640 478 aa10.54□□□□□ -0.72
AMF1YOR378W ALD2P47771 506 aa10.53□□□□□ -0.72
AMF1YOR378W NOP8Q08287 484 aaPredicted RBP10.53□□□□□ -0.72
AMF1YOR378W BUG1Q12191 341 aa10.53□□□□□ -0.72
AMF1YOR378W BDF1P35817 686 aa10.53□□□□□ -0.72
AMF1YOR378W FPR3P38911 411 aaKnown RBP10.53□□□□□ -0.72
AMF1YOR378W TEA1P47988 759 aa10.53□□□□□ -0.72
AMF1YOR378W VPS64Q03944 604 aa10.53□□□□□ -0.72
AMF1YOR378W CST6P40535 587 aa10.52□□□□□ -0.73
AMF1YOR378W CSI1Q04368 295 aa10.52□□□□□ -0.73
AMF1YOR378W TFA1P36100 482 aa10.51□□□□□ -0.73
AMF1YOR378W YBL086CP38177 466 aa10.51□□□□□ -0.73
AMF1YOR378W CTH1P47976 325 aa10.51□□□□□ -0.73
AMF1YOR378W NYV1Q12255 253 aa10.51□□□□□ -0.73
AMF1YOR378W ARG8P18544 423 aa10.5□□□□□ -0.73
AMF1YOR378W SER1P33330 395 aaKnown RBP10.5□□□□□ -0.73
AMF1YOR378W APL2P36000 726 aaPredicted RBP10.5□□□□□ -0.73
AMF1YOR378W YPR204WQ08995 1032 aa10.5□□□□□ -0.73
AMF1YOR378W TRP5P00931 707 aaKnown RBP10.49□□□□□ -0.73
AMF1YOR378W RPS19AP07280 144 aaKnown RBP10.49□□□□□ -0.73
AMF1YOR378W RPS19BP07281 144 aaPredicted RBP10.49□□□□□ -0.73
AMF1YOR378W NUP133P36161 1157 aa10.49□□□□□ -0.73
AMF1YOR378W UGA2P38067 497 aa10.49□□□□□ -0.73
AMF1YOR378W YJR008WP47085 338 aa10.49□□□□□ -0.73
AMF1YOR378W UTP22P53254 1237 aaPredicted RBP10.49□□□□□ -0.73
AMF1YOR378W SWI1P09547 1314 aa10.49□□□□□ -0.73
AMF1YOR378W SSA2P10592 639 aaKnown RBP10.48□□□□□ -0.73
AMF1YOR378W RAD24P32641 659 aa10.48□□□□□ -0.73
AMF1YOR378W RPG1P38249 964 aaKnown RBP10.48□□□□□ -0.73
AMF1YOR378W POL32P47110 350 aa10.48□□□□□ -0.73
AMF1YOR378W YGL082WP53155 381 aa10.48□□□□□ -0.73
AMF1YOR378W YGR122WP53272 402 aa10.48□□□□□ -0.73
AMF1YOR378W ALD3P54114 506 aa10.48□□□□□ -0.73
AMF1YOR378W PUF6Q04373 656 aaKnown RBP10.48□□□□□ -0.73
AMF1YOR378W YLR271WQ06152 274 aa10.48□□□□□ -0.73
AMF1YOR378W YNG2P38806 282 aaKnown RBP10.46□□□□□ -0.74
AMF1YOR378W DCD1P06773 312 aa10.45□□□□□ -0.74
AMF1YOR378W PKH1Q03407 766 aa10.45□□□□□ -0.74
AMF1YOR378W SWC3P31376 625 aa10.44□□□□□ -0.74
AMF1YOR378W BOI2P39969 1040 aa10.44□□□□□ -0.74
AMF1YOR378W LPD1P09624 499 aaKnown RBP10.43□□□□□ -0.74
AMF1YOR378W SET1P38827 1080 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms