RNA–Protein interactions for RNA: YMR162C

DNF3, Transcript of Trans-golgi network aminophospholipid translocase (flippase), yeastyeast

Gene DNF3, Length 4,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNF3YMR162C UTP22P53254 1237 aaPredicted RBP2.1□□□□□ -2.07
DNF3YMR162C PUS5Q06244 254 aa2.1□□□□□ -2.07
DNF3YMR162C YER156CP40093 338 aaKnown RBP2.1□□□□□ -2.07
DNF3YMR162C VPS53P47061 822 aa2.1□□□□□ -2.07
DNF3YMR162C YOL036WQ08206 761 aa2.1□□□□□ -2.07
DNF3YMR162C TCB1Q12466 1186 aa2.1□□□□□ -2.07
DNF3YMR162C SPT21P35209 758 aa2.1□□□□□ -2.07
DNF3YMR162C COG8Q04632 607 aa2.1□□□□□ -2.07
DNF3YMR162C RRP5Q05022 1729 aaKnown RBP2.1□□□□□ -2.07
DNF3YMR162C MSM1P22438 575 aa2.1□□□□□ -2.07
DNF3YMR162C PUP2P32379 260 aa2.1□□□□□ -2.07
DNF3YMR162C YKL222CP35995 705 aa2.1□□□□□ -2.07
DNF3YMR162C SMC1P32908 1225 aa2.09□□□□□ -2.07
DNF3YMR162C SMY2P32909 740 aaKnown RBP2.09□□□□□ -2.07
DNF3YMR162C FPK1P53739 893 aa2.09□□□□□ -2.07
DNF3YMR162C PWP2P25635 923 aaKnown RBP2.09□□□□□ -2.07
DNF3YMR162C STS1P38637 319 aa2.09□□□□□ -2.07
DNF3YMR162C RAD26P40352 1085 aa2.09□□□□□ -2.07
DNF3YMR162C RPN11P43588 306 aaKnown RBP2.09□□□□□ -2.07
DNF3YMR162C ATG1P53104 897 aa2.09□□□□□ -2.07
DNF3YMR162C TFC8Q12308 588 aa2.09□□□□□ -2.07
DNF3YMR162C RAD54P32863 898 aa2.09□□□□□ -2.08
DNF3YMR162C LIF1P53150 421 aa2.09□□□□□ -2.08
DNF3YMR162C PUS6P53294 404 aa2.09□□□□□ -2.08
DNF3YMR162C MAC1P35192 417 aa2.09□□□□□ -2.08
DNF3YMR162C PRP45P28004 379 aaPredicted RBP2.08□□□□□ -2.08
DNF3YMR162C GPT2P36148 743 aa2.08□□□□□ -2.08
DNF3YMR162C POM152P39685 1337 aa2.08□□□□□ -2.08
DNF3YMR162C YBL036CP38197 257 aa2.08□□□□□ -2.08
DNF3YMR162C PKH1Q03407 766 aa2.08□□□□□ -2.08
DNF3YMR162C NSE3Q05541 303 aa2.08□□□□□ -2.08
DNF3YMR162C YDL129WQ07555 291 aa2.08□□□□□ -2.08
DNF3YMR162C TIF6Q12522 245 aaKnown RBP2.08□□□□□ -2.08
DNF3YMR162C SDH2P21801 266 aa2.08□□□□□ -2.08
DNF3YMR162C GRX1P25373 110 aaKnown RBP2.08□□□□□ -2.08
DNF3YMR162C WHI3P34761 661 aaKnown RBP2.08□□□□□ -2.08
DNF3YMR162C MMF1P40185 145 aaKnown RBP2.08□□□□□ -2.08
DNF3YMR162C FKH1P40466 484 aa2.08□□□□□ -2.08
DNF3YMR162C NUP192P47054 1683 aa2.08□□□□□ -2.08
DNF3YMR162C RRP14P36080 434 aaKnown RBP2.07□□□□□ -2.08
DNF3YMR162C YDR341CQ05506 607 aaKnown RBP2.07□□□□□ -2.08
DNF3YMR162C MSB4Q12317 492 aa2.07□□□□□ -2.08
DNF3YMR162C TYS1P36421 394 aaKnown RBP2.07□□□□□ -2.08
DNF3YMR162C UBP10P53874 792 aaPredicted RBP2.07□□□□□ -2.08
DNF3YMR162C SLI15P38283 698 aa2.07□□□□□ -2.08
DNF3YMR162C MSN5P52918 1224 aa2.07□□□□□ -2.08
DNF3YMR162C RRT6P53117 311 aaPredicted RBP2.07□□□□□ -2.08
DNF3YMR162C PAP2P53632 584 aaKnown RBP2.07□□□□□ -2.08
DNF3YMR162C NOP53Q12080 455 aaKnown RBP2.07□□□□□ -2.08
DNF3YMR162C PSH1Q12161 406 aa2.07□□□□□ -2.08
DNF3YMR162C KRE5P22023 1365 aa2.07□□□□□ -2.08
DNF3YMR162C YKL023WP36103 277 aaKnown RBP2.07□□□□□ -2.08
DNF3YMR162C ENV11P53246 860 aa2.07□□□□□ -2.08
DNF3YMR162C BRN1P38170 754 aa2.06□□□□□ -2.08
DNF3YMR162C VAB2P40003 282 aa2.06□□□□□ -2.08
DNF3YMR162C CWC15Q03772 175 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C MPC54Q08550 464 aa2.06□□□□□ -2.08
DNF3YMR162C NCB2Q92317 146 aa2.06□□□□□ -2.08
DNF3YMR162C SPT2P06843 333 aaPredicted RBP2.06□□□□□ -2.08
DNF3YMR162C RAD4P14736 754 aa2.06□□□□□ -2.08
DNF3YMR162C SEC14P24280 304 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C RRP8P38961 392 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C DUS1P53759 423 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C NST1P53935 1240 aa2.06□□□□□ -2.08
DNF3YMR162C FMP30Q02883 468 aa2.06□□□□□ -2.08
DNF3YMR162C ISW2Q08773 1120 aa2.06□□□□□ -2.08
DNF3YMR162C TYW1Q08960 810 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C TY3A-GQ12173 290 aa2.06□□□□□ -2.08
DNF3YMR162C TY3A-IQ99219 290 aa2.06□□□□□ -2.08
DNF3YMR162C PDI1P17967 522 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C RNR4P49723 345 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C CTF4Q01454 927 aa2.06□□□□□ -2.08
DNF3YMR162C ESF1Q06344 628 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C CFT2Q12102 859 aaPredicted RBP2.06□□□□□ -2.08
DNF3YMR162C GRX4P32642 244 aa2.06□□□□□ -2.08
DNF3YMR162C FMO1P38866 432 aa2.06□□□□□ -2.08
DNF3YMR162C LYS14P40971 790 aa2.06□□□□□ -2.08
DNF3YMR162C EIS1Q05050 843 aaKnown RBP2.06□□□□□ -2.08
DNF3YMR162C MHP1P43638 1398 aa2.05□□□□□ -2.08
DNF3YMR162C CSE4P36012 229 aa2.05□□□□□ -2.08
DNF3YMR162C YKL133CP36066 463 aa2.05□□□□□ -2.08
DNF3YMR162C RPG1P38249 964 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C RPN8Q08723 338 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C RAV1P47104 1357 aa2.05□□□□□ -2.08
DNF3YMR162C VAS1P07806 1104 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C SSA4P22202 642 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C MCD4P36051 919 aa2.05□□□□□ -2.08
DNF3YMR162C SIR4P11978 1358 aa2.05□□□□□ -2.08
DNF3YMR162C CDC19P00549 500 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C POL30P15873 258 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C NYV1Q12255 253 aa2.05□□□□□ -2.08
DNF3YMR162C AFG2P32794 780 aa2.05□□□□□ -2.08
DNF3YMR162C NOP2P40991 618 aaKnown RBP2.05□□□□□ -2.08
DNF3YMR162C ADE6P38972 1358 aaKnown RBP2.04□□□□□ -2.08
DNF3YMR162C ALT2P52892 507 aa2.04□□□□□ -2.08
DNF3YMR162C NCS6P53088 359 aa2.04□□□□□ -2.08
DNF3YMR162C YBP2P53169 641 aa2.04□□□□□ -2.08
DNF3YMR162C RAT1Q02792 1006 aaKnown RBP2.04□□□□□ -2.08
DNF3YMR162C SAS4Q04003 481 aa2.04□□□□□ -2.08
DNF3YMR162C SES1P07284 462 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms