RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YIR007WP40566 764 aa5.72□□□□□ -1.49
PDX1YGR193C KTR1P27810 393 aaKnown RBP5.71□□□□□ -1.5
PDX1YGR193C RTT106P40161 455 aa5.71□□□□□ -1.5
PDX1YGR193C YLR346CQ06139 101 aa5.71□□□□□ -1.5
PDX1YGR193C YBL086CP38177 466 aa5.7□□□□□ -1.5
PDX1YGR193C YNR021WP53723 404 aaKnown RBP5.7□□□□□ -1.5
PDX1YGR193C TY1A-BLQ12266 440 aa5.7□□□□□ -1.5
PDX1YGR193C AAD14P42884 376 aa5.69□□□□□ -1.5
PDX1YGR193C SCW11P53189 542 aa5.69□□□□□ -1.5
PDX1YGR193C MIP1P15801 1254 aa5.68□□□□□ -1.5
PDX1YGR193C APP1P53933 587 aa5.68□□□□□ -1.5
PDX1YGR193C YGR035CP53222 116 aa5.67□□□□□ -1.5
PDX1YGR193C PKH3Q03306 898 aaPredicted RBP5.67□□□□□ -1.5
PDX1YGR193C ARG82P07250 355 aa5.66□□□□□ -1.5
PDX1YGR193C DLD1P32891 587 aa5.66□□□□□ -1.5
PDX1YGR193C HPF1Q05164 967 aa5.66□□□□□ -1.5
PDX1YGR193C TRK2P28584 889 aa5.65□□□□□ -1.5
PDX1YGR193C EMW1P42842 904 aaKnown RBP5.65□□□□□ -1.5
PDX1YGR193C LSC2P53312 427 aa5.65□□□□□ -1.5
PDX1YGR193C YJR098CP47139 656 aa5.64□□□□□ -1.51
PDX1YGR193C FIG4P42837 879 aa5.63□□□□□ -1.51
PDX1YGR193C ARG8P18544 423 aa5.62□□□□□ -1.51
PDX1YGR193C TCB1Q12466 1186 aa5.62□□□□□ -1.51
PDX1YGR193C ROG3P43602 733 aa5.6□□□□□ -1.51
PDX1YGR193C UBP2Q01476 1272 aa5.6□□□□□ -1.51
PDX1YGR193C AIM7Q12156 149 aa5.6□□□□□ -1.51
PDX1YGR193C MKS1P34072 584 aa5.59□□□□□ -1.51
PDX1YGR193C CSN12P47130 423 aa5.59□□□□□ -1.51
PDX1YGR193C DFG5Q05031 458 aa5.59□□□□□ -1.51
PDX1YGR193C CCP1P00431 361 aa5.58□□□□□ -1.52
PDX1YGR193C YPR084WQ06821 456 aa5.58□□□□□ -1.52
PDX1YGR193C RAD59Q12223 238 aa5.58□□□□□ -1.52
PDX1YGR193C OSH7P38755 437 aa5.57□□□□□ -1.52
PDX1YGR193C MTC5Q03897 1148 aa5.57□□□□□ -1.52
PDX1YGR193C TY1A-MR1Q04215 440 aa5.57□□□□□ -1.52
PDX1YGR193C TEC1P18412 486 aa5.55□□□□□ -1.52
PDX1YGR193C FBP26P32604 452 aa5.52□□□□□ -1.53
PDX1YGR193C NAM8Q00539 523 aaKnown RBP5.52□□□□□ -1.53
PDX1YGR193C BDS1Q08347 646 aa5.51□□□□□ -1.53
PDX1YGR193C CDC19P00549 500 aaKnown RBP5.5□□□□□ -1.53
PDX1YGR193C STE6P12866 1290 aa5.5□□□□□ -1.53
PDX1YGR193C YPR204WQ08995 1032 aa5.5□□□□□ -1.53
PDX1YGR193C MAK16P10962 306 aaPredicted RBP5.49□□□□□ -1.53
PDX1YGR193C DPH6Q12429 685 aa5.49□□□□□ -1.53
PDX1YGR193C JJJ3P47138 172 aa5.47□□□□□ -1.53
PDX1YGR193C GUT2P32191 649 aa5.46□□□□□ -1.54
PDX1YGR193C MDJ1P35191 511 aa5.46□□□□□ -1.54
PDX1YGR193C LYS5P50113 272 aa5.46□□□□□ -1.54
PDX1YGR193C ICP55P40051 511 aa5.45□□□□□ -1.54
PDX1YGR193C ISU1Q03020 165 aa5.45□□□□□ -1.54
PDX1YGR193C ATG20Q07528 640 aa5.45□□□□□ -1.54
PDX1YGR193C VTC4P47075 721 aa5.44□□□□□ -1.54
PDX1YGR193C KIN1P13185 1064 aa5.43□□□□□ -1.54
PDX1YGR193C CUZ1P53899 274 aa5.43□□□□□ -1.54
PDX1YGR193C FRA1Q07825 749 aa5.43□□□□□ -1.54
PDX1YGR193C SSA2P10592 639 aaKnown RBP5.42□□□□□ -1.54
PDX1YGR193C PUS1Q12211 544 aaKnown RBP5.42□□□□□ -1.54
PDX1YGR193C DAL1P32375 460 aa5.41□□□□□ -1.54
PDX1YGR193C LSB3P43603 459 aaKnown RBP5.41□□□□□ -1.54
PDX1YGR193C NAF1P53919 492 aaKnown RBP5.41□□□□□ -1.54
PDX1YGR193C STE20Q03497 939 aaKnown RBP5.41□□□□□ -1.54
PDX1YGR193C PHM7Q12252 991 aa5.4□□□□□ -1.54
PDX1YGR193C YFL066CP43538 392 aa5.39□□□□□ -1.55
PDX1YGR193C NSG2P53898 299 aa5.39□□□□□ -1.55
PDX1YGR193C URN1Q06525 465 aaKnown RBP5.39□□□□□ -1.55
PDX1YGR193C ISF1P32488 338 aa5.38□□□□□ -1.55
PDX1YGR193C DLD3P39976 496 aaKnown RBP5.37□□□□□ -1.55
PDX1YGR193C APL6P46682 809 aa5.37□□□□□ -1.55
PDX1YGR193C ISR1Q06098 443 aaKnown RBP5.37□□□□□ -1.55
PDX1YGR193C WTM2Q12206 467 aa5.37□□□□□ -1.55
PDX1YGR193C TY1A-DR3Q12441 440 aa5.37□□□□□ -1.55
PDX1YGR193C SLA1P32790 1244 aa5.36□□□□□ -1.55
PDX1YGR193C GUA1P38625 525 aaKnown RBP5.36□□□□□ -1.55
PDX1YGR193C SSN3P39073 555 aa5.36□□□□□ -1.55
PDX1YGR193C CEM1P39525 442 aa5.36□□□□□ -1.55
PDX1YGR193C EMP47P43555 445 aa5.36□□□□□ -1.55
PDX1YGR193C THI72Q08579 599 aa5.36□□□□□ -1.55
PDX1YGR193C LEO1P38439 464 aa5.35□□□□□ -1.55
PDX1YGR193C HAL5P38970 855 aaKnown RBP5.35□□□□□ -1.55
PDX1YGR193C UBP15P50101 1230 aa5.35□□□□□ -1.55
PDX1YGR193C MCM16Q12262 181 aa5.35□□□□□ -1.55
PDX1YGR193C AI1P03875 834 aa5.33□□□□□ -1.56
PDX1YGR193C SPT2P06843 333 aaPredicted RBP5.33□□□□□ -1.56
PDX1YGR193C DIT1P21623 536 aa5.33□□□□□ -1.56
PDX1YGR193C MSN5P52918 1224 aa5.33□□□□□ -1.56
PDX1YGR193C YMR265CQ03508 461 aaKnown RBP5.33□□□□□ -1.56
PDX1YGR193C SYT1Q06836 1226 aa5.33□□□□□ -1.56
PDX1YGR193C RPP2BP02400 110 aaKnown RBP5.32□□□□□ -1.56
PDX1YGR193C YDJ1P25491 409 aaKnown RBP5.32□□□□□ -1.56
PDX1YGR193C UTR2P32623 467 aa5.32□□□□□ -1.56
PDX1YGR193C UTP7P40055 554 aaKnown RBP5.32□□□□□ -1.56
PDX1YGR193C DAT1P13483 248 aaKnown RBP5.31□□□□□ -1.56
PDX1YGR193C CSE4P36012 229 aa5.31□□□□□ -1.56
PDX1YGR193C SBE2P42223 864 aaKnown RBP5.31□□□□□ -1.56
PDX1YGR193C CCT8P47079 568 aaKnown RBP5.3□□□□□ -1.56
PDX1YGR193C MRX12P47084 519 aa5.3□□□□□ -1.56
PDX1YGR193C KRE33P53914 1056 aaKnown RBP5.3□□□□□ -1.56
PDX1YGR193C ADE12P80210 433 aaKnown RBP5.3□□□□□ -1.56
PDX1YGR193C LEU3P08638 886 aa5.29□□□□□ -1.56
PDX1YGR193C SPT5P27692 1063 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms