RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W STE20Q03497 939 aaKnown RBP11.14□□□□□ -0.63
LCP5YER127W GUT2P32191 649 aa11.13□□□□□ -0.63
LCP5YER127W GEF1P37020 779 aa11.12□□□□□ -0.63
LCP5YER127W MRF1P30775 413 aaPredicted RBP11.1□□□□□ -0.63
LCP5YER127W KTR7P40504 517 aa11.1□□□□□ -0.63
LCP5YER127W NOB1Q08444 459 aaKnown RBP11.1□□□□□ -0.63
LCP5YER127W RDS2P19541 446 aaKnown RBP11.09□□□□□ -0.63
LCP5YER127W RRD1P40454 393 aaKnown RBP11.08□□□□□ -0.64
LCP5YER127W FRA1Q07825 749 aa11.08□□□□□ -0.64
LCP5YER127W MOD5P07884 428 aa11.07□□□□□ -0.64
LCP5YER127W TPD3P31383 635 aa11.07□□□□□ -0.64
LCP5YER127W TGL4P36165 910 aa11.07□□□□□ -0.64
LCP5YER127W RPL34AP87262 121 aaPredicted RBP11.07□□□□□ -0.64
LCP5YER127W PUP1P25043 261 aa11.06□□□□□ -0.64
LCP5YER127W YPR084WQ06821 456 aa11.06□□□□□ -0.64
LCP5YER127W VAC17P25591 423 aa11.05□□□□□ -0.64
LCP5YER127W PEP12P32854 288 aa11.05□□□□□ -0.64
LCP5YER127W MRX12P47084 519 aa11.05□□□□□ -0.64
LCP5YER127W YML083CQ04526 418 aa11.04□□□□□ -0.64
LCP5YER127W ATG3P40344 310 aa11.03□□□□□ -0.64
LCP5YER127W KIP2P28743 706 aa11.02□□□□□ -0.65
LCP5YER127W ECM23Q02710 187 aa11.02□□□□□ -0.65
LCP5YER127W ITT1Q04638 464 aa11.01□□□□□ -0.65
LCP5YER127W SOH1P38633 127 aa11□□□□□ -0.65
LCP5YER127W PUS5Q06244 254 aa11□□□□□ -0.65
LCP5YER127W BCK2P33306 851 aa10.99□□□□□ -0.65
LCP5YER127W FRK1Q03002 865 aaPredicted RBP10.99□□□□□ -0.65
LCP5YER127W IXR1P33417 597 aa10.98□□□□□ -0.65
LCP5YER127W BDP1P46678 594 aa10.98□□□□□ -0.65
LCP5YER127W SDH2P21801 266 aa10.97□□□□□ -0.65
LCP5YER127W SLX8P40072 274 aa10.96□□□□□ -0.65
LCP5YER127W GAL2P13181 574 aa10.93□□□□□ -0.66
LCP5YER127W APL6P46682 809 aa10.93□□□□□ -0.66
LCP5YER127W SYH1Q02875 849 aaKnown RBP10.93□□□□□ -0.66
LCP5YER127W UTP13Q05946 817 aaKnown RBP10.93□□□□□ -0.66
LCP5YER127W YEL077CQ3E7X8 1277 aa10.93□□□□□ -0.66
LCP5YER127W CST6P40535 587 aa10.92□□□□□ -0.66
LCP5YER127W UBX7P38349 436 aa10.91□□□□□ -0.66
LCP5YER127W APP1P53933 587 aa10.9□□□□□ -0.66
LCP5YER127W ISR1Q06098 443 aaKnown RBP10.9□□□□□ -0.66
LCP5YER127W ATG20Q07528 640 aa10.89□□□□□ -0.67
LCP5YER127W CDC3P32457 520 aaKnown RBP10.88□□□□□ -0.67
LCP5YER127W XDJ1P39102 459 aa10.88□□□□□ -0.67
LCP5YER127W YML020WQ03722 664 aa10.88□□□□□ -0.67
LCP5YER127W PHO87P25360 923 aa10.87□□□□□ -0.67
LCP5YER127W HAP4P14064 554 aa10.85□□□□□ -0.67
LCP5YER127W HAL5P38970 855 aaKnown RBP10.85□□□□□ -0.67
LCP5YER127W CBC2Q08920 208 aaKnown RBP RIP-Chip data10.85□□□□□ -0.67not detected
LCP5YER127W MIP1P15801 1254 aa10.84□□□□□ -0.67
LCP5YER127W PDI1P17967 522 aaKnown RBP10.84□□□□□ -0.67
LCP5YER127W ACS2P52910 683 aaKnown RBP10.84□□□□□ -0.67
LCP5YER127W TSC13Q99190 310 aa10.83□□□□□ -0.68
LCP5YER127W EMW1P42842 904 aaKnown RBP10.82□□□□□ -0.68
LCP5YER127W HDA3Q06623 655 aa10.81□□□□□ -0.68
LCP5YER127W AMS1P22855 1083 aa10.79□□□□□ -0.68
LCP5YER127W YFL034WP43564 1073 aa10.79□□□□□ -0.68
LCP5YER127W MKS1P34072 584 aa10.77□□□□□ -0.69
LCP5YER127W AIM9P40053 627 aaKnown RBP10.77□□□□□ -0.69
LCP5YER127W ROM1P53046 1155 aa10.77□□□□□ -0.69
LCP5YER127W HED1Q03937 162 aa10.76□□□□□ -0.69
LCP5YER127W GAS4Q08271 471 aa10.76□□□□□ -0.69
LCP5YER127W HAT1Q12341 374 aa10.76□□□□□ -0.69
LCP5YER127W ISU1Q03020 165 aa10.75□□□□□ -0.69
LCP5YER127W NTH2P35172 780 aa10.74□□□□□ -0.69
LCP5YER127W DAT1P13483 248 aaKnown RBP10.73□□□□□ -0.69
LCP5YER127W FBP26P32604 452 aa10.73□□□□□ -0.69
LCP5YER127W PUF6Q04373 656 aaKnown RBP10.73□□□□□ -0.69
LCP5YER127W VAN1P23642 535 aa10.72□□□□□ -0.69
LCP5YER127W UTR2P32623 467 aa10.72□□□□□ -0.69
LCP5YER127W MRT4P33201 236 aaKnown RBP10.72□□□□□ -0.69
LCP5YER127W RAS1P01119 309 aa10.71□□□□□ -0.69
LCP5YER127W NOP8Q08287 484 aaPredicted RBP10.71□□□□□ -0.69
LCP5YER127W CWC15Q03772 175 aaKnown RBP10.7□□□□□ -0.7
LCP5YER127W DFG5Q05031 458 aa10.7□□□□□ -0.7
LCP5YER127W PUN1Q06991 263 aa10.7□□□□□ -0.7
LCP5YER127W SLD2P34252 453 aa10.69□□□□□ -0.7
LCP5YER127W TBS1P38114 1094 aa10.69□□□□□ -0.7
LCP5YER127W CLA4P48562 842 aa10.69□□□□□ -0.7
LCP5YER127W YBL086CP38177 466 aa10.68□□□□□ -0.7
LCP5YER127W SPT2P06843 333 aaPredicted RBP10.67□□□□□ -0.7
LCP5YER127W RPS6AP0CX37 236 aaKnown RBP10.67□□□□□ -0.7
LCP5YER127W RPS6BP0CX38 236 aaPredicted RBP10.67□□□□□ -0.7
LCP5YER127W TPS3P38426 1054 aaKnown RBP10.67□□□□□ -0.7
LCP5YER127W BDS1Q08347 646 aa10.67□□□□□ -0.7
LCP5YER127W KAR5Q04746 504 aa10.66□□□□□ -0.7
LCP5YER127W TRS33Q99394 268 aa10.66□□□□□ -0.7
LCP5YER127W RPP2BP02400 110 aaKnown RBP10.65□□□□□ -0.7
LCP5YER127W SWI5P08153 709 aa10.65□□□□□ -0.7
LCP5YER127W STE6P12866 1290 aa10.65□□□□□ -0.7
LCP5YER127W SSF1P38789 453 aaPredicted RBP10.65□□□□□ -0.7
LCP5YER127W PNP1Q05788 311 aa10.65□□□□□ -0.7
LCP5YER127W CYT1P07143 309 aa10.64□□□□□ -0.71
LCP5YER127W MET32Q12041 191 aa10.64□□□□□ -0.71
LCP5YER127W SRS2P12954 1174 aa10.63□□□□□ -0.71
LCP5YER127W WTM2Q12206 467 aa10.63□□□□□ -0.71
LCP5YER127W CWH41P53008 833 aa10.62□□□□□ -0.71
LCP5YER127W YBL113CQ7M4S9 792 aa10.61□□□□□ -0.71
LCP5YER127W AIR1P40507 360 aaKnown RBP10.6□□□□□ -0.71
LCP5YER127W UGA3P26370 528 aa10.59□□□□□ -0.71
LCP5YER127W DLD3P39976 496 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms