RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YRB30P53107 440 aaPredicted RBP9.85□□□□□ -0.83
PUP3YER094C ATG13Q06628 738 aa9.85□□□□□ -0.83
PUP3YER094C RIM15P43565 1770 aa9.85□□□□□ -0.83
PUP3YER094C NUP145P49687 1317 aa9.84□□□□□ -0.83
PUP3YER094C ZDS1P50111 915 aaKnown RBP9.84□□□□□ -0.83
PUP3YER094C KCC4P25389 1037 aa9.83□□□□□ -0.84
PUP3YER094C FOX2Q02207 900 aaKnown RBP9.83□□□□□ -0.84
PUP3YER094C FUN12P39730 1002 aaKnown RBP9.82□□□□□ -0.84
PUP3YER094C MAM1P40065 302 aa9.82□□□□□ -0.84
PUP3YER094C RRT14P40470 206 aa9.82□□□□□ -0.84
PUP3YER094C COBP00163 385 aa9.81□□□□□ -0.84
PUP3YER094C UGA3P26370 528 aa9.81□□□□□ -0.84
PUP3YER094C GYP7P48365 746 aa9.81□□□□□ -0.84
PUP3YER094C NSE3Q05541 303 aa9.81□□□□□ -0.84
PUP3YER094C OSM1P21375 501 aaKnown RBP9.8□□□□□ -0.84
PUP3YER094C YBR287WP38355 427 aa9.8□□□□□ -0.84
PUP3YER094C YMR074CQ04773 145 aa9.8□□□□□ -0.84
PUP3YER094C LAM6Q08001 693 aa9.8□□□□□ -0.84
PUP3YER094C EDE1P34216 1381 aa9.79□□□□□ -0.84
PUP3YER094C YBP2P53169 641 aa9.79□□□□□ -0.84
PUP3YER094C GLN1P32288 370 aaKnown RBP9.78□□□□□ -0.84
PUP3YER094C RPN11P43588 306 aaKnown RBP9.78□□□□□ -0.84
PUP3YER094C YJL181WP46987 611 aa9.78□□□□□ -0.84
PUP3YER094C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.78□□□□□ -0.84not detected
PUP3YER094C ALE1Q08548 619 aa9.78□□□□□ -0.84
PUP3YER094C BMS1Q08965 1183 aaKnown RBP9.78□□□□□ -0.84
PUP3YER094C MAK21Q12176 1025 aaKnown RBP9.78□□□□□ -0.84
PUP3YER094C PRP40P33203 583 aaKnown RBP9.77□□□□□ -0.85
PUP3YER094C YKR075CP36155 307 aa9.77□□□□□ -0.85
PUP3YER094C LYS2P07702 1392 aa9.76□□□□□ -0.85
PUP3YER094C COQ4O13525 335 aa9.76□□□□□ -0.85
PUP3YER094C RAD2P07276 1031 aa9.75□□□□□ -0.85
PUP3YER094C DAL5P15365 543 aa9.75□□□□□ -0.85
PUP3YER094C SRT1Q03175 343 aa9.75□□□□□ -0.85
PUP3YER094C RMT2Q03305 412 aa9.75□□□□□ -0.85
PUP3YER094C UBP1P25037 809 aa9.74□□□□□ -0.85
PUP3YER094C TFA1P36100 482 aa9.73□□□□□ -0.85
PUP3YER094C YFR016CP43597 1233 aaKnown RBP9.73□□□□□ -0.85
PUP3YER094C BUD31P25337 157 aaPredicted RBP9.72□□□□□ -0.85
PUP3YER094C GRX1P25373 110 aaKnown RBP9.72□□□□□ -0.85
PUP3YER094C YIL092WP40497 633 aa9.72□□□□□ -0.85
PUP3YER094C BUD27P43573 796 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
PUP3YER094C RAD4P14736 754 aa9.71□□□□□ -0.86
PUP3YER094C FPR3P38911 411 aaKnown RBP9.7□□□□□ -0.86
PUP3YER094C YOL057WQ08225 711 aa9.7□□□□□ -0.86
PUP3YER094C NOP53Q12080 455 aaKnown RBP9.7□□□□□ -0.86
PUP3YER094C NPR2P39923 615 aa9.68□□□□□ -0.86
PUP3YER094C TUM1Q08686 304 aaKnown RBP9.68□□□□□ -0.86
PUP3YER094C MSB4Q12317 492 aa9.68□□□□□ -0.86
PUP3YER094C ZDS2P54786 942 aa9.67□□□□□ -0.86
PUP3YER094C SSP2Q08646 371 aa9.67□□□□□ -0.86
PUP3YER094C YPP1P46951 817 aa9.66□□□□□ -0.86
PUP3YER094C MDG1P53885 366 aa9.66□□□□□ -0.86
PUP3YER094C VPS64Q03944 604 aa9.66□□□□□ -0.86
PUP3YER094C NOP8Q08287 484 aaPredicted RBP9.66□□□□□ -0.86
PUP3YER094C UTP10P42945 1769 aaKnown RBP9.65□□□□□ -0.86
PUP3YER094C TRP5P00931 707 aaKnown RBP9.65□□□□□ -0.86
PUP3YER094C MRP7P12687 371 aa9.65□□□□□ -0.86
PUP3YER094C NOP2P40991 618 aaKnown RBP9.65□□□□□ -0.86
PUP3YER094C DNM1P54861 757 aa9.64□□□□□ -0.87
PUP3YER094C CSI1Q04368 295 aa9.64□□□□□ -0.87
PUP3YER094C GRE2Q12068 342 aaKnown RBP9.64□□□□□ -0.87
PUP3YER094C NUP133P36161 1157 aa9.63□□□□□ -0.87
PUP3YER094C POL32P47110 350 aa9.63□□□□□ -0.87
PUP3YER094C TEA1P47988 759 aa9.63□□□□□ -0.87
PUP3YER094C PUF6Q04373 656 aaKnown RBP9.63□□□□□ -0.87
PUP3YER094C RAD24P32641 659 aa9.62□□□□□ -0.87
PUP3YER094C CST6P40535 587 aa9.62□□□□□ -0.87
PUP3YER094C LYS4P49367 693 aaPredicted RBP9.62□□□□□ -0.87
PUP3YER094C YGR122WP53272 402 aa9.62□□□□□ -0.87
PUP3YER094C YDR306CQ06640 478 aa9.62□□□□□ -0.87
PUP3YER094C BUG1Q12191 341 aa9.61□□□□□ -0.87
PUP3YER094C PHM7Q12252 991 aa9.61□□□□□ -0.87
PUP3YER094C SWI1P09547 1314 aa9.6□□□□□ -0.87
PUP3YER094C RPS19AP07280 144 aaKnown RBP9.6□□□□□ -0.87
PUP3YER094C RPS19BP07281 144 aaPredicted RBP9.6□□□□□ -0.87
PUP3YER094C PRI1P10363 409 aa9.6□□□□□ -0.87
PUP3YER094C SER1P33330 395 aaKnown RBP9.6□□□□□ -0.87
PUP3YER094C APL2P36000 726 aaPredicted RBP9.6□□□□□ -0.87
PUP3YER094C PKH1Q03407 766 aa9.6□□□□□ -0.87
PUP3YER094C YNG2P38806 282 aaKnown RBP9.59□□□□□ -0.87
PUP3YER094C YGL082WP53155 381 aa9.59□□□□□ -0.87
PUP3YER094C SPO1P53541 631 aa9.59□□□□□ -0.87
PUP3YER094C SWC3P31376 625 aa9.58□□□□□ -0.88
PUP3YER094C BDF1P35817 686 aa9.58□□□□□ -0.88
PUP3YER094C YPR204WQ08995 1032 aa9.58□□□□□ -0.88
PUP3YER094C ARG8P18544 423 aa9.57□□□□□ -0.88
PUP3YER094C BOI2P39969 1040 aa9.57□□□□□ -0.88
PUP3YER094C YBL086CP38177 466 aa9.56□□□□□ -0.88
PUP3YER094C ALD2P47771 506 aa9.56□□□□□ -0.88
PUP3YER094C YLR271WQ06152 274 aa9.56□□□□□ -0.88
PUP3YER094C NYV1Q12255 253 aa9.56□□□□□ -0.88
PUP3YER094C ILV3P39522 585 aaKnown RBP9.55□□□□□ -0.88
PUP3YER094C YJR008WP47085 338 aa9.55□□□□□ -0.88
PUP3YER094C CTH1P47976 325 aa9.55□□□□□ -0.88
PUP3YER094C UTP22P53254 1237 aaPredicted RBP9.55□□□□□ -0.88
PUP3YER094C SSA2P10592 639 aaKnown RBP9.54□□□□□ -0.88
PUP3YER094C RPG1P38249 964 aaKnown RBP9.54□□□□□ -0.88
PUP3YER094C DCD1P06773 312 aa9.53□□□□□ -0.88
PUP3YER094C LPD1P09624 499 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms