RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C THI22Q06490 572 aa7.39□□□□□ -1.23
SEC20YDR498C RPO41P13433 1351 aaKnown RBP7.38□□□□□ -1.23
SEC20YDR498C RPP0P05317 312 aaKnown RBP7.38□□□□□ -1.23
SEC20YDR498C KAR2P16474 682 aaKnown RBP7.38□□□□□ -1.23
SEC20YDR498C VPS27P40343 622 aaKnown RBP7.38□□□□□ -1.23
SEC20YDR498C PIB1Q06651 286 aa7.38□□□□□ -1.23
SEC20YDR498C GAS4Q08271 471 aa7.38□□□□□ -1.23
SEC20YDR498C MST1P07236 462 aa7.37□□□□□ -1.23
SEC20YDR498C VPS29P38759 282 aa7.37□□□□□ -1.23
SEC20YDR498C HEF3P53978 1044 aaKnown RBP7.37□□□□□ -1.23
SEC20YDR498C MIF2P35201 549 aa7.36□□□□□ -1.23
SEC20YDR498C RTR1P40084 226 aaPredicted RBP7.36□□□□□ -1.23
SEC20YDR498C CDC45Q08032 650 aa7.36□□□□□ -1.23
SEC20YDR498C PRD1P25375 712 aa7.35□□□□□ -1.23
SEC20YDR498C GRX4P32642 244 aa7.35□□□□□ -1.23
SEC20YDR498C SAP155P43612 1002 aa7.35□□□□□ -1.23
SEC20YDR498C YMR1P47147 688 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
SEC20YDR498C DPS1P04802 557 aaKnown RBP7.34□□□□□ -1.23
SEC20YDR498C BUD31P25337 157 aaPredicted RBP7.34□□□□□ -1.23
SEC20YDR498C UBP9P39967 754 aa7.34□□□□□ -1.23
SEC20YDR498C RTT109Q07794 436 aa7.33□□□□□ -1.24
SEC20YDR498C UTP10P42945 1769 aaKnown RBP7.33□□□□□ -1.24
SEC20YDR498C DBP1P24784 617 aaKnown RBP7.32□□□□□ -1.24
SEC20YDR498C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
SEC20YDR498C YFR006WP43590 535 aa7.32□□□□□ -1.24
SEC20YDR498C MSB3P48566 633 aaPredicted RBP7.32□□□□□ -1.24
SEC20YDR498C RTF1P53064 558 aa7.32□□□□□ -1.24
SEC20YDR498C TPD3P31383 635 aa7.31□□□□□ -1.24
SEC20YDR498C GTT3P39996 337 aa7.31□□□□□ -1.24
SEC20YDR498C PAP2P53632 584 aaKnown RBP7.31□□□□□ -1.24
SEC20YDR498C AKL1P38080 1108 aaKnown RBP7.29□□□□□ -1.24
SEC20YDR498C STS1P38637 319 aa7.29□□□□□ -1.24
SEC20YDR498C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
SEC20YDR498C SIR4P11978 1358 aa7.29□□□□□ -1.24
SEC20YDR498C PRP5P21372 849 aaPredicted RBP7.28□□□□□ -1.24
SEC20YDR498C RAM2P29703 316 aa7.28□□□□□ -1.24
SEC20YDR498C DSD1P53095 428 aa7.28□□□□□ -1.24
SEC20YDR498C SLM3Q12093 417 aa7.28□□□□□ -1.24
SEC20YDR498C PRP45P28004 379 aaPredicted RBP7.27□□□□□ -1.25
SEC20YDR498C YIL092WP40497 633 aa7.27□□□□□ -1.25
SEC20YDR498C DUR1,2P32528 1835 aaKnown RBP7.27□□□□□ -1.25
SEC20YDR498C NTH2P35172 780 aa7.26□□□□□ -1.25
SEC20YDR498C WSC3Q12215 556 aa7.25□□□□□ -1.25
SEC20YDR498C YBL029C-AQ3E756 94 aa7.25□□□□□ -1.25
SEC20YDR498C YRB30P53107 440 aaPredicted RBP7.24□□□□□ -1.25
SEC20YDR498C RSF2P46974 1380 aa7.23□□□□□ -1.25
SEC20YDR498C DAL5P15365 543 aa7.22□□□□□ -1.25
SEC20YDR498C ILV3P39522 585 aaKnown RBP7.22□□□□□ -1.25
SEC20YDR498C XKS1P42826 600 aa7.22□□□□□ -1.25
SEC20YDR498C YNL050CP53952 270 aa7.22□□□□□ -1.25
SEC20YDR498C HSP104P31539 908 aaKnown RBP7.21□□□□□ -1.26
SEC20YDR498C NUP145P49687 1317 aa7.21□□□□□ -1.26
SEC20YDR498C MAK11P20484 414 aaKnown RBP7.2□□□□□ -1.26
SEC20YDR498C APP1P53933 587 aa7.2□□□□□ -1.26
SEC20YDR498C ENT1Q12518 454 aa7.2□□□□□ -1.26
SEC20YDR498C VMA1P17255 1071 aaKnown RBP7.19□□□□□ -1.26
SEC20YDR498C RRT14P40470 206 aa7.19□□□□□ -1.26
SEC20YDR498C POL32P47110 350 aa7.19□□□□□ -1.26
SEC20YDR498C SRT1Q03175 343 aa7.19□□□□□ -1.26
SEC20YDR498C INP54Q08227 384 aaKnown RBP7.19□□□□□ -1.26
SEC20YDR498C TCB1Q12466 1186 aa7.19□□□□□ -1.26
SEC20YDR498C VNX1P42839 908 aa7.18□□□□□ -1.26
SEC20YDR498C COQ4O13525 335 aa7.17□□□□□ -1.26
SEC20YDR498C GYP7P48365 746 aa7.17□□□□□ -1.26
SEC20YDR498C ADE16P54113 591 aaKnown RBP7.17□□□□□ -1.26
SEC20YDR498C ENV9Q08651 330 aa7.17□□□□□ -1.26
SEC20YDR498C EDE1P34216 1381 aa7.17□□□□□ -1.26
SEC20YDR498C YBR287WP38355 427 aa7.16□□□□□ -1.26
SEC20YDR498C TRP5P00931 707 aaKnown RBP7.15□□□□□ -1.26
SEC20YDR498C RAD2P07276 1031 aa7.15□□□□□ -1.26
SEC20YDR498C ZDS1P50111 915 aaKnown RBP7.15□□□□□ -1.26
SEC20YDR498C YGR122WP53272 402 aa7.15□□□□□ -1.26
SEC20YDR498C AOS1Q06624 347 aa7.15□□□□□ -1.26
SEC20YDR498C BMS1Q08965 1183 aaKnown RBP7.15□□□□□ -1.26
SEC20YDR498C LYS2P07702 1392 aa7.15□□□□□ -1.26
SEC20YDR498C MAM1P40065 302 aa7.14□□□□□ -1.27
SEC20YDR498C IES2P40154 320 aa7.14□□□□□ -1.27
SEC20YDR498C SPP1Q03012 353 aa7.14□□□□□ -1.27
SEC20YDR498C DMA1P38823 416 aa7.13□□□□□ -1.27
SEC20YDR498C CTF4Q01454 927 aa7.13□□□□□ -1.27
SEC20YDR498C CSI1Q04368 295 aa7.13□□□□□ -1.27
SEC20YDR498C RPC31P17890 251 aa7.12□□□□□ -1.27
SEC20YDR498C OSM1P21375 501 aaKnown RBP7.12□□□□□ -1.27
SEC20YDR498C SET4P42948 560 aa7.12□□□□□ -1.27
SEC20YDR498C ZDS2P54786 942 aa7.12□□□□□ -1.27
SEC20YDR498C FRK1Q03002 865 aaPredicted RBP7.12□□□□□ -1.27
SEC20YDR498C PUF6Q04373 656 aaKnown RBP7.12□□□□□ -1.27
SEC20YDR498C YOL036WQ08206 761 aa7.12□□□□□ -1.27
SEC20YDR498C KCC4P25389 1037 aa7.11□□□□□ -1.27
SEC20YDR498C COQ8P27697 501 aa7.11□□□□□ -1.27
SEC20YDR498C RAD24P32641 659 aa7.11□□□□□ -1.27
SEC20YDR498C BUD27P43573 796 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
SEC20YDR498C YPP1P46951 817 aa7.11□□□□□ -1.27
SEC20YDR498C YDR306CQ06640 478 aa7.11□□□□□ -1.27
SEC20YDR498C ALE1Q08548 619 aa7.11□□□□□ -1.27
SEC20YDR498C MAK21Q12176 1025 aaKnown RBP7.11□□□□□ -1.27
SEC20YDR498C UGA3P26370 528 aa7.1□□□□□ -1.27
SEC20YDR498C SAM3Q08986 587 aa7.1□□□□□ -1.27
SEC20YDR498C RAD4P14736 754 aa7.09□□□□□ -1.27
SEC20YDR498C SIS1P25294 352 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms