RNA–Protein interactions for RNA: YDR388W

RVS167, Transcript of Actin-associated protein with roles in endocytosis and exocytosis, yeast

Gene RVS167, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVS167	YDR388W	DOT5	P40553	215 aa		18.91	■□□□□ 0.62
RVS167	YDR388W	YFR016C	P43597	1233 aa	Known RBP	18.91	■□□□□ 0.62
RVS167	YDR388W	ATG13	Q06628	738 aa		18.91	■□□□□ 0.62
RVS167	YDR388W	UGA3	P26370	528 aa		18.9	■□□□□ 0.62
RVS167	YDR388W	HEF3	P53978	1044 aa	Known RBP	18.9	■□□□□ 0.62
RVS167	YDR388W	RTT109	Q07794	436 aa		18.9	■□□□□ 0.62
RVS167	YDR388W	KCC4	P25389	1037 aa		18.89	■□□□□ 0.61
RVS167	YDR388W	FRK1	Q03002	865 aa	Predicted RBP	18.89	■□□□□ 0.61
RVS167	YDR388W	NUP145	P49687	1317 aa		18.88	■□□□□ 0.61
RVS167	YDR388W	YMR074C	Q04773	145 aa		18.88	■□□□□ 0.61
RVS167	YDR388W	NSE3	Q05541	303 aa		18.87	■□□□□ 0.61
RVS167	YDR388W	LAM6	Q08001	693 aa		18.87	■□□□□ 0.61
RVS167	YDR388W	GYP7	P48365	746 aa		18.86	■□□□□ 0.61
RVS167	YDR388W	FOX2	Q02207	900 aa	Known RBP	18.86	■□□□□ 0.61
RVS167	YDR388W	OSM1	P21375	501 aa	Known RBP	18.84	■□□□□ 0.61
RVS167	YDR388W	COB	P00163	385 aa		18.83	■□□□□ 0.6
RVS167	YDR388W	GLN1	P32288	370 aa	Known RBP	18.83	■□□□□ 0.6
RVS167	YDR388W	PRP40	P33203	583 aa	Known RBP	18.82	■□□□□ 0.6
RVS167	YDR388W	YJL181W	P46987	611 aa		18.82	■□□□□ 0.6
RVS167	YDR388W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	18.82	■□□□□ 0.6	not detected
RVS167	YDR388W	MAK21	Q12176	1025 aa	Known RBP	18.82	■□□□□ 0.6
RVS167	YDR388W	LYS2	P07702	1392 aa		18.81	■□□□□ 0.6
RVS167	YDR388W	RRT14	P40470	206 aa		18.8	■□□□□ 0.6
RVS167	YDR388W	YBP2	P53169	641 aa		18.79	■□□□□ 0.6
RVS167	YDR388W	UBP1	P25037	809 aa		18.77	■□□□□ 0.6
RVS167	YDR388W	BMS1	Q08965	1183 aa	Known RBP	18.76	■□□□□ 0.59
RVS167	YDR388W	YKR075C	P36155	307 aa		18.75	■□□□□ 0.59
RVS167	YDR388W	RPN11	P43588	306 aa	Known RBP	18.75	■□□□□ 0.59
RVS167	YDR388W	GRX1	P25373	110 aa	Known RBP	18.73	■□□□□ 0.59
RVS167	YDR388W	RMT2	Q03305	412 aa		18.73	■□□□□ 0.59
RVS167	YDR388W	RAD2	P07276	1031 aa		18.72	■□□□□ 0.59
RVS167	YDR388W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	18.71	■□□□□ 0.59	not detected
RVS167	YDR388W	COQ4	O13525	335 aa		18.7	■□□□□ 0.58
RVS167	YDR388W	ALE1	Q08548	619 aa		18.7	■□□□□ 0.58
RVS167	YDR388W	SRT1	Q03175	343 aa		18.68	■□□□□ 0.58
RVS167	YDR388W	BUD31	P25337	157 aa	Predicted RBP	18.66	■□□□□ 0.58
RVS167	YDR388W	YBR287W	P38355	427 aa		18.66	■□□□□ 0.58
RVS167	YDR388W	MDG1	P53885	366 aa		18.66	■□□□□ 0.58
RVS167	YDR388W	RIM15	P43565	1770 aa		18.65	■□□□□ 0.58
RVS167	YDR388W	MSB4	Q12317	492 aa		18.65	■□□□□ 0.58
RVS167	YDR388W	YOL057W	Q08225	711 aa		18.64	■□□□□ 0.57
RVS167	YDR388W	YIL092W	P40497	633 aa		18.63	■□□□□ 0.57
RVS167	YDR388W	RAD4	P14736	754 aa		18.62	■□□□□ 0.57
RVS167	YDR388W	FPR3	P38911	411 aa	Known RBP	18.62	■□□□□ 0.57
RVS167	YDR388W	NOP53	Q12080	455 aa	Known RBP	18.62	■□□□□ 0.57
RVS167	YDR388W	SSP2	Q08646	371 aa		18.61	■□□□□ 0.57
RVS167	YDR388W	DAL5	P15365	543 aa		18.6	■□□□□ 0.57
RVS167	YDR388W	NPR2	P39923	615 aa		18.6	■□□□□ 0.57
RVS167	YDR388W	FUN12	P39730	1002 aa	Known RBP	18.59	■□□□□ 0.57
RVS167	YDR388W	DNM1	P54861	757 aa		18.56	■□□□□ 0.56
RVS167	YDR388W	TUM1	Q08686	304 aa	Known RBP	18.56	■□□□□ 0.56
RVS167	YDR388W	YPP1	P46951	817 aa		18.55	■□□□□ 0.56
RVS167	YDR388W	PHM7	Q12252	991 aa		18.54	■□□□□ 0.56
RVS167	YDR388W	PRI1	P10363	409 aa		18.53	■□□□□ 0.56
RVS167	YDR388W	NOP8	Q08287	484 aa	Predicted RBP	18.53	■□□□□ 0.56
RVS167	YDR388W	TFA1	P36100	482 aa		18.52	■□□□□ 0.56
RVS167	YDR388W	GRE2	Q12068	342 aa	Known RBP	18.51	■□□□□ 0.55
RVS167	YDR388W	MRP7	P12687	371 aa		18.5	■□□□□ 0.55
RVS167	YDR388W	GTT3	P39996	337 aa		18.49	■□□□□ 0.55
RVS167	YDR388W	CST6	P40535	587 aa		18.49	■□□□□ 0.55
RVS167	YDR388W	YDR306C	Q06640	478 aa		18.49	■□□□□ 0.55
RVS167	YDR388W	BDF1	P35817	686 aa		18.48	■□□□□ 0.55
RVS167	YDR388W	BUG1	Q12191	341 aa		18.48	■□□□□ 0.55
RVS167	YDR388W	RPS19A	P07280	144 aa	Known RBP	18.47	■□□□□ 0.55
RVS167	YDR388W	RPS19B	P07281	144 aa	Predicted RBP	18.47	■□□□□ 0.55
RVS167	YDR388W	ALD2	P47771	506 aa		18.47	■□□□□ 0.55
RVS167	YDR388W	TEA1	P47988	759 aa		18.47	■□□□□ 0.55
RVS167	YDR388W	ZDS2	P54786	942 aa		18.46	■□□□□ 0.55
RVS167	YDR388W	VPS64	Q03944	604 aa		18.45	■□□□□ 0.54
RVS167	YDR388W	CSI1	Q04368	295 aa		18.45	■□□□□ 0.54
RVS167	YDR388W	LYS4	P49367	693 aa	Predicted RBP	18.44	■□□□□ 0.54
RVS167	YDR388W	TRP5	P00931	707 aa	Known RBP	18.43	■□□□□ 0.54
RVS167	YDR388W	YJR008W	P47085	338 aa		18.43	■□□□□ 0.54
RVS167	YDR388W	POL32	P47110	350 aa		18.43	■□□□□ 0.54
RVS167	YDR388W	NUP133	P36161	1157 aa		18.42	■□□□□ 0.54
RVS167	YDR388W	UTP22	P53254	1237 aa	Predicted RBP	18.42	■□□□□ 0.54
RVS167	YDR388W	PUF6	Q04373	656 aa	Known RBP	18.4	■□□□□ 0.54
RVS167	YDR388W	YLR271W	Q06152	274 aa		18.4	■□□□□ 0.54
RVS167	YDR388W	SWI1	P09547	1314 aa		18.4	■□□□□ 0.54
RVS167	YDR388W	SER1	P33330	395 aa	Known RBP	18.4	■□□□□ 0.54
RVS167	YDR388W	NOP2	P40991	618 aa	Known RBP	18.4	■□□□□ 0.54
RVS167	YDR388W	YPR204W	Q08995	1032 aa		18.4	■□□□□ 0.54
RVS167	YDR388W	NYV1	Q12255	253 aa		18.4	■□□□□ 0.54
RVS167	YDR388W	UGA2	P38067	497 aa		18.39	■□□□□ 0.53
RVS167	YDR388W	RAD24	P32641	659 aa		18.38	■□□□□ 0.53
RVS167	YDR388W	YNG2	P38806	282 aa	Known RBP	18.38	■□□□□ 0.53
RVS167	YDR388W	ALD3	P54114	506 aa		18.38	■□□□□ 0.53
RVS167	YDR388W	ARG8	P18544	423 aa		18.37	■□□□□ 0.53
RVS167	YDR388W	YBL086C	P38177	466 aa		18.37	■□□□□ 0.53
RVS167	YDR388W	APL2	P36000	726 aa	Predicted RBP	18.36	■□□□□ 0.53
RVS167	YDR388W	YGL082W	P53155	381 aa		18.36	■□□□□ 0.53
RVS167	YDR388W	PKH1	Q03407	766 aa		18.36	■□□□□ 0.53
RVS167	YDR388W	BOI2	P39969	1040 aa		18.35	■□□□□ 0.53
RVS167	YDR388W	SSA2	P10592	639 aa	Known RBP	18.34	■□□□□ 0.53
RVS167	YDR388W	HGH1	P48362	394 aa	Known RBP	18.34	■□□□□ 0.53
RVS167	YDR388W	RPG1	P38249	964 aa	Known RBP	18.33	■□□□□ 0.53
RVS167	YDR388W	CTH1	P47976	325 aa		18.33	■□□□□ 0.53
RVS167	YDR388W	YGR122W	P53272	402 aa		18.33	■□□□□ 0.53
RVS167	YDR388W	UTP10	P42945	1769 aa	Known RBP	18.33	■□□□□ 0.52
RVS167	YDR388W	SPO1	P53541	631 aa		18.32	■□□□□ 0.52

Retrieved 100 of 5,963 RNA–protein pairs in 1094 ms