RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeastyeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP1YDR328C YMR074CQ04773 145 aa9.25□□□□□ -0.93
SKP1YDR328C RTT109Q07794 436 aa9.25□□□□□ -0.93
SKP1YDR328C RVB2Q12464 471 aaKnown RBP9.24□□□□□ -0.93
SKP1YDR328C OSM1P21375 501 aaKnown RBP9.23□□□□□ -0.93
SKP1YDR328C TPD3P31383 635 aa9.23□□□□□ -0.93
SKP1YDR328C FRK1Q03002 865 aaPredicted RBP9.23□□□□□ -0.93
SKP1YDR328C YRB30P53107 440 aaPredicted RBP9.22□□□□□ -0.93
SKP1YDR328C COBP00163 385 aa9.21□□□□□ -0.94
SKP1YDR328C YKR075CP36155 307 aa9.21□□□□□ -0.94
SKP1YDR328C MAM1P40065 302 aa9.21□□□□□ -0.94
SKP1YDR328C ZDS1P50111 915 aaKnown RBP9.21□□□□□ -0.94
SKP1YDR328C KCC4P25389 1037 aa9.2□□□□□ -0.94
SKP1YDR328C UGA3P26370 528 aa9.19□□□□□ -0.94
SKP1YDR328C RPN11P43588 306 aaKnown RBP9.19□□□□□ -0.94
SKP1YDR328C ATG13Q06628 738 aa9.19□□□□□ -0.94
SKP1YDR328C EDE1P34216 1381 aa9.19□□□□□ -0.94
SKP1YDR328C GYP7P48365 746 aa9.18□□□□□ -0.94
SKP1YDR328C LYS2P07702 1392 aa9.17□□□□□ -0.94
SKP1YDR328C RRT14P40470 206 aa9.17□□□□□ -0.94
SKP1YDR328C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
SKP1YDR328C NSE3Q05541 303 aa9.16□□□□□ -0.94
SKP1YDR328C LAM6Q08001 693 aa9.16□□□□□ -0.94
SKP1YDR328C BMS1Q08965 1183 aaKnown RBP9.16□□□□□ -0.94
SKP1YDR328C NPR2P39923 615 aa9.15□□□□□ -0.94
SKP1YDR328C YBP2P53169 641 aa9.15□□□□□ -0.94
SKP1YDR328C COQ4O13525 335 aa9.14□□□□□ -0.95
SKP1YDR328C BUD31P25337 157 aaPredicted RBP9.13□□□□□ -0.95
SKP1YDR328C PRP40P33203 583 aaKnown RBP9.13□□□□□ -0.95
SKP1YDR328C YFR016CP43597 1233 aaKnown RBP9.13□□□□□ -0.95
SKP1YDR328C SRT1Q03175 343 aa9.13□□□□□ -0.95
SKP1YDR328C ALE1Q08548 619 aa9.13□□□□□ -0.95
SKP1YDR328C TUM1Q08686 304 aaKnown RBP9.13□□□□□ -0.95
SKP1YDR328C GRX1P25373 110 aaKnown RBP9.12□□□□□ -0.95
SKP1YDR328C YBR287WP38355 427 aa9.11□□□□□ -0.95
SKP1YDR328C YJL181WP46987 611 aa9.11□□□□□ -0.95
SKP1YDR328C RMT2Q03305 412 aa9.11□□□□□ -0.95
SKP1YDR328C MAK21Q12176 1025 aaKnown RBP9.11□□□□□ -0.95
SKP1YDR328C UBP1P25037 809 aa9.1□□□□□ -0.95
SKP1YDR328C YIL092WP40497 633 aa9.1□□□□□ -0.95
SKP1YDR328C YOL057WQ08225 711 aa9.1□□□□□ -0.95
SKP1YDR328C RAD4P14736 754 aa9.09□□□□□ -0.95
SKP1YDR328C FUN12P39730 1002 aaKnown RBP9.09□□□□□ -0.95
SKP1YDR328C NOP53Q12080 455 aaKnown RBP9.09□□□□□ -0.95
SKP1YDR328C MSB4Q12317 492 aa9.09□□□□□ -0.95
SKP1YDR328C UTP10P42945 1769 aaKnown RBP9.08□□□□□ -0.96
SKP1YDR328C LYS4P49367 693 aaPredicted RBP9.07□□□□□ -0.96
SKP1YDR328C RAD2P07276 1031 aa9.06□□□□□ -0.96
SKP1YDR328C DAL5P15365 543 aa9.06□□□□□ -0.96
SKP1YDR328C BUD27P43573 796 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
SKP1YDR328C GRE2Q12068 342 aaKnown RBP9.06□□□□□ -0.96
SKP1YDR328C MDG1P53885 366 aa9.05□□□□□ -0.96
SKP1YDR328C ZDS2P54786 942 aa9.05□□□□□ -0.96
SKP1YDR328C YDR306CQ06640 478 aa9.05□□□□□ -0.96
SKP1YDR328C SSP2Q08646 371 aa9.05□□□□□ -0.96
SKP1YDR328C PHM7Q12252 991 aa9.05□□□□□ -0.96
SKP1YDR328C YPP1P46951 817 aa9.04□□□□□ -0.96
SKP1YDR328C ARG8P18544 423 aa9.03□□□□□ -0.96
SKP1YDR328C CTH1P47976 325 aa9.03□□□□□ -0.96
SKP1YDR328C DNM1P54861 757 aa9.03□□□□□ -0.96
SKP1YDR328C PRI1P10363 409 aa9.02□□□□□ -0.97
SKP1YDR328C GTT3P39996 337 aa9.02□□□□□ -0.97
SKP1YDR328C YJR008WP47085 338 aa9.02□□□□□ -0.97
SKP1YDR328C YPR204WQ08995 1032 aa9.02□□□□□ -0.97
SKP1YDR328C NYV1Q12255 253 aa9.02□□□□□ -0.97
SKP1YDR328C RPS19AP07280 144 aaKnown RBP9.01□□□□□ -0.97
SKP1YDR328C RPS19BP07281 144 aaPredicted RBP9.01□□□□□ -0.97
SKP1YDR328C MRP7P12687 371 aa9.01□□□□□ -0.97
SKP1YDR328C DCD1P06773 312 aa9□□□□□ -0.97
SKP1YDR328C BDF1P35817 686 aa9□□□□□ -0.97
SKP1YDR328C APL2P36000 726 aaPredicted RBP9□□□□□ -0.97
SKP1YDR328C CST6P40535 587 aa9□□□□□ -0.97
SKP1YDR328C TEA1P47988 759 aa9□□□□□ -0.97
SKP1YDR328C CSI1Q04368 295 aa9□□□□□ -0.97
SKP1YDR328C SWI1P09547 1314 aa9□□□□□ -0.97
SKP1YDR328C TRP5P00931 707 aaKnown RBP8.99□□□□□ -0.97
SKP1YDR328C YBL086CP38177 466 aa8.99□□□□□ -0.97
SKP1YDR328C POL32P47110 350 aa8.99□□□□□ -0.97
SKP1YDR328C ALD2P47771 506 aa8.99□□□□□ -0.97
SKP1YDR328C YGR122WP53272 402 aa8.99□□□□□ -0.97
SKP1YDR328C BUG1Q12191 341 aa8.99□□□□□ -0.97
SKP1YDR328C RAD24P32641 659 aa8.98□□□□□ -0.97
SKP1YDR328C UTP22P53254 1237 aaPredicted RBP8.98□□□□□ -0.97
SKP1YDR328C VPS64Q03944 604 aa8.98□□□□□ -0.97
SKP1YDR328C YLR271WQ06152 274 aa8.98□□□□□ -0.97
SKP1YDR328C SER1P33330 395 aaKnown RBP8.97□□□□□ -0.97
SKP1YDR328C NUP133P36161 1157 aa8.97□□□□□ -0.97
SKP1YDR328C RPG1P38249 964 aaKnown RBP8.97□□□□□ -0.97
SKP1YDR328C SSA2P10592 639 aaKnown RBP8.96□□□□□ -0.98
SKP1YDR328C SET1P38827 1080 aaKnown RBP8.96□□□□□ -0.98
SKP1YDR328C YGL082WP53155 381 aa8.96□□□□□ -0.98
SKP1YDR328C NOP8Q08287 484 aaPredicted RBP8.96□□□□□ -0.98
SKP1YDR328C SWC3P31376 625 aa8.95□□□□□ -0.98
SKP1YDR328C UGA2P38067 497 aa8.95□□□□□ -0.98
SKP1YDR328C FPR3P38911 411 aaKnown RBP8.95□□□□□ -0.98
SKP1YDR328C BOI2P39969 1040 aa8.95□□□□□ -0.98
SKP1YDR328C PUF6Q04373 656 aaKnown RBP8.95□□□□□ -0.98
SKP1YDR328C TOS1P38288 455 aa8.94□□□□□ -0.98
SKP1YDR328C YNG2P38806 282 aaKnown RBP8.94□□□□□ -0.98
SKP1YDR328C ILV3P39522 585 aaKnown RBP8.94□□□□□ -0.98
SKP1YDR328C ALD3P54114 506 aa8.94□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms