RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeastyeast

Gene SWC5, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC5YBR231C CDC45Q08032 650 aa13.64□□□□□ -0.23
SWC5YBR231C PRP40P33203 583 aaKnown RBP13.63□□□□□ -0.23
SWC5YBR231C YKR075CP36155 307 aa13.63□□□□□ -0.23
SWC5YBR231C RPN11P43588 306 aaKnown RBP13.63□□□□□ -0.23
SWC5YBR231C ATG13Q06628 738 aa13.63□□□□□ -0.23
SWC5YBR231C OSM1P21375 501 aaKnown RBP13.62□□□□□ -0.23
SWC5YBR231C UBP1P25037 809 aa13.62□□□□□ -0.23
SWC5YBR231C PRS1P32895 427 aaKnown RBP13.62□□□□□ -0.23
SWC5YBR231C BUD31P25337 157 aaPredicted RBP13.61□□□□□ -0.23
SWC5YBR231C KCC4P25389 1037 aa13.61□□□□□ -0.23
SWC5YBR231C YJL181WP46987 611 aa13.6□□□□□ -0.23
SWC5YBR231C UGA3P26370 528 aa13.59□□□□□ -0.23
SWC5YBR231C MAM1P40065 302 aa13.59□□□□□ -0.23
SWC5YBR231C LYS2P07702 1392 aa13.58□□□□□ -0.23
SWC5YBR231C YRB30P53107 440 aaPredicted RBP13.58□□□□□ -0.24
SWC5YBR231C HEF3P53978 1044 aaKnown RBP13.58□□□□□ -0.24
SWC5YBR231C SAP155P43612 1002 aa13.57□□□□□ -0.24
SWC5YBR231C SUI2P20459 304 aaKnown RBP13.56□□□□□ -0.24
SWC5YBR231C ZDS1P50111 915 aaKnown RBP13.56□□□□□ -0.24
SWC5YBR231C RTT109Q07794 436 aa13.56□□□□□ -0.24
SWC5YBR231C TPD3P31383 635 aa13.55□□□□□ -0.24
SWC5YBR231C NPR2P39923 615 aa13.55□□□□□ -0.24
SWC5YBR231C YFR016CP43597 1233 aaKnown RBP13.55□□□□□ -0.24
SWC5YBR231C YBP2P53169 641 aa13.55□□□□□ -0.24
SWC5YBR231C NSE3Q05541 303 aa13.55□□□□□ -0.24
SWC5YBR231C GRX1P25373 110 aaKnown RBP13.54□□□□□ -0.24
SWC5YBR231C GYP7P48365 746 aa13.53□□□□□ -0.24
SWC5YBR231C PRI1P10363 409 aa13.51□□□□□ -0.25
SWC5YBR231C RMT2Q03305 412 aa13.5□□□□□ -0.25
SWC5YBR231C RVB2Q12464 471 aaKnown RBP13.5□□□□□ -0.25
SWC5YBR231C RRT14P40470 206 aa13.49□□□□□ -0.25
SWC5YBR231C MSB4Q12317 492 aa13.49□□□□□ -0.25
SWC5YBR231C BMS1Q08965 1183 aaKnown RBP13.48□□□□□ -0.25
SWC5YBR231C RAD4P14736 754 aa13.47□□□□□ -0.25
SWC5YBR231C ALE1Q08548 619 aa13.47□□□□□ -0.25
SWC5YBR231C GTT3P39996 337 aa13.46□□□□□ -0.25
SWC5YBR231C MDG1P53885 366 aa13.45□□□□□ -0.26
SWC5YBR231C NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.45□□□□□ -0.26not detected
SWC5YBR231C COQ4O13525 335 aa13.44□□□□□ -0.26
SWC5YBR231C NOP53Q12080 455 aaKnown RBP13.43□□□□□ -0.26
SWC5YBR231C MAK21Q12176 1025 aaKnown RBP13.43□□□□□ -0.26
SWC5YBR231C LYS4P49367 693 aaPredicted RBP13.42□□□□□ -0.26
SWC5YBR231C TUM1Q08686 304 aaKnown RBP13.42□□□□□ -0.26
SWC5YBR231C UTP10P42945 1769 aaKnown RBP13.42□□□□□ -0.26
SWC5YBR231C BDF1P35817 686 aa13.41□□□□□ -0.26
SWC5YBR231C ALD2P47771 506 aa13.41□□□□□ -0.26
SWC5YBR231C SRT1Q03175 343 aa13.41□□□□□ -0.26
SWC5YBR231C SSP2Q08646 371 aa13.41□□□□□ -0.26
SWC5YBR231C GRE2Q12068 342 aaKnown RBP13.41□□□□□ -0.26
SWC5YBR231C YOL057WQ08225 711 aa13.4□□□□□ -0.26
SWC5YBR231C PHM7Q12252 991 aa13.39□□□□□ -0.27
SWC5YBR231C YBL086CP38177 466 aa13.38□□□□□ -0.27
SWC5YBR231C YBR287WP38355 427 aa13.38□□□□□ -0.27
SWC5YBR231C BUG1Q12191 341 aa13.38□□□□□ -0.27
SWC5YBR231C CTH1P47976 325 aa13.37□□□□□ -0.27
SWC5YBR231C BUD27P43573 796 aaKnown RBP RIP-Chip data13.36□□□□□ -0.27not detected
SWC5YBR231C UGA2P38067 497 aa13.35□□□□□ -0.27
SWC5YBR231C UTP22P53254 1237 aaPredicted RBP13.35□□□□□ -0.27
SWC5YBR231C SSA2P10592 639 aaKnown RBP13.34□□□□□ -0.27
SWC5YBR231C YIL092WP40497 633 aa13.34□□□□□ -0.27
SWC5YBR231C DNM1P54861 757 aa13.34□□□□□ -0.27
SWC5YBR231C RAD2P07276 1031 aa13.33□□□□□ -0.28
SWC5YBR231C TEA1P47988 759 aa13.33□□□□□ -0.28
SWC5YBR231C ALD3P54114 506 aa13.32□□□□□ -0.28
SWC5YBR231C YDR306CQ06640 478 aa13.32□□□□□ -0.28
SWC5YBR231C NYV1Q12255 253 aa13.32□□□□□ -0.28
SWC5YBR231C MRP7P12687 371 aa13.3□□□□□ -0.28
SWC5YBR231C RPG1P38249 964 aaKnown RBP13.3□□□□□ -0.28
SWC5YBR231C YPP1P46951 817 aa13.3□□□□□ -0.28
SWC5YBR231C CST6P40535 587 aa13.29□□□□□ -0.28
SWC5YBR231C YJR008WP47085 338 aa13.29□□□□□ -0.28
SWC5YBR231C ZDS2P54786 942 aa13.29□□□□□ -0.28
SWC5YBR231C DAL5P15365 543 aa13.28□□□□□ -0.28
SWC5YBR231C ARG8P18544 423 aa13.28□□□□□ -0.28
SWC5YBR231C YPR204WQ08995 1032 aa13.28□□□□□ -0.28
SWC5YBR231C SWI1P09547 1314 aa13.27□□□□□ -0.29
SWC5YBR231C SER1P33330 395 aaKnown RBP13.26□□□□□ -0.29
SWC5YBR231C YLR271WQ06152 274 aa13.26□□□□□ -0.29
SWC5YBR231C TOS1P38288 455 aa13.25□□□□□ -0.29
SWC5YBR231C VPS64Q03944 604 aa13.25□□□□□ -0.29
SWC5YBR231C RPS19AP07280 144 aaKnown RBP13.24□□□□□ -0.29
SWC5YBR231C RPS19BP07281 144 aaPredicted RBP13.24□□□□□ -0.29
SWC5YBR231C APL2P36000 726 aaPredicted RBP13.24□□□□□ -0.29
SWC5YBR231C YGL082WP53155 381 aa13.24□□□□□ -0.29
SWC5YBR231C NOP8Q08287 484 aaPredicted RBP13.24□□□□□ -0.29
SWC5YBR231C NUP133P36161 1157 aa13.23□□□□□ -0.29
SWC5YBR231C FUN12P39730 1002 aaKnown RBP13.23□□□□□ -0.29
SWC5YBR231C RAT1Q02792 1006 aaKnown RBP13.22□□□□□ -0.29
SWC5YBR231C CSI1Q04368 295 aa13.22□□□□□ -0.29
SWC5YBR231C SSK22P25390 1331 aaPredicted RBP13.21□□□□□ -0.29
SWC5YBR231C DCD1P06773 312 aa13.21□□□□□ -0.29
SWC5YBR231C RAD24P32641 659 aa13.21□□□□□ -0.29
SWC5YBR231C SET1P38827 1080 aaKnown RBP13.21□□□□□ -0.29
SWC5YBR231C LPD1P09624 499 aaKnown RBP13.2□□□□□ -0.3
SWC5YBR231C TRP5P00931 707 aaKnown RBP13.19□□□□□ -0.3
SWC5YBR231C BOI2P39969 1040 aa13.19□□□□□ -0.3
SWC5YBR231C HPC2Q01448 625 aa13.19□□□□□ -0.3
SWC5YBR231C DIB1Q06819 143 aaPredicted RBP13.19□□□□□ -0.3
SWC5YBR231C YGR122WP53272 402 aa13.18□□□□□ -0.3
SWC5YBR231C POL32P47110 350 aa13.17□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms