RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	YGR035C	P53222	116 aa		7.3	□□□□□ -1.24
SHE1	YBL031W	HPC2	Q01448	625 aa		7.3	□□□□□ -1.24
SHE1	YBL031W	MMP1	Q12372	583 aa		7.29	□□□□□ -1.24
SHE1	YBL031W	MIP1	P15801	1254 aa		7.28	□□□□□ -1.24
SHE1	YBL031W	TRK2	P28584	889 aa		7.28	□□□□□ -1.24
SHE1	YBL031W	MRT4	P33201	236 aa	Known RBP	7.28	□□□□□ -1.24
SHE1	YBL031W	GUA1	P38625	525 aa	Known RBP	7.28	□□□□□ -1.24
SHE1	YBL031W	YIR007W	P40566	764 aa		7.28	□□□□□ -1.24
SHE1	YBL031W	MTC5	Q03897	1148 aa		7.28	□□□□□ -1.24
SHE1	YBL031W	GLY1	P37303	387 aa	Known RBP	7.27	□□□□□ -1.25
SHE1	YBL031W	HST2	P53686	357 aa		7.27	□□□□□ -1.25
SHE1	YBL031W	SSA2	P10592	639 aa	Known RBP	7.26	□□□□□ -1.25
SHE1	YBL031W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.26	□□□□□ -1.25	not detected
SHE1	YBL031W	ESS1	P22696	170 aa		7.24	□□□□□ -1.25
SHE1	YBL031W	HPF1	Q05164	967 aa		7.24	□□□□□ -1.25
SHE1	YBL031W	TY1A-BL	Q12266	440 aa		7.24	□□□□□ -1.25
SHE1	YBL031W	GLN1	P32288	370 aa	Known RBP	7.23	□□□□□ -1.25
SHE1	YBL031W	ARG82	P07250	355 aa		7.22	□□□□□ -1.25
SHE1	YBL031W	BRL1	P38770	471 aa		7.22	□□□□□ -1.25
SHE1	YBL031W	RTT106	P40161	455 aa		7.22	□□□□□ -1.25
SHE1	YBL031W	LSC2	P53312	427 aa		7.22	□□□□□ -1.25
SHE1	YBL031W	APP1	P53933	587 aa		7.21	□□□□□ -1.26
SHE1	YBL031W	ITT1	Q04638	464 aa		7.21	□□□□□ -1.26
SHE1	YBL031W	DLD1	P32891	587 aa		7.2	□□□□□ -1.26
SHE1	YBL031W	UBP2	Q01476	1272 aa		7.2	□□□□□ -1.26
SHE1	YBL031W	VAC17	P25591	423 aa		7.19	□□□□□ -1.26
SHE1	YBL031W	YJU3	P28321	313 aa		7.19	□□□□□ -1.26
SHE1	YBL031W	AAD14	P42884	376 aa		7.19	□□□□□ -1.26
SHE1	YBL031W	CSN12	P47130	423 aa		7.19	□□□□□ -1.26
SHE1	YBL031W	TFB3	Q03290	321 aa		7.19	□□□□□ -1.26
SHE1	YBL031W	YBL086C	P38177	466 aa		7.16	□□□□□ -1.26
SHE1	YBL031W	TCB1	Q12466	1186 aa		7.15	□□□□□ -1.26
SHE1	YBL031W	YJR098C	P47139	656 aa		7.14	□□□□□ -1.27
SHE1	YBL031W	PKH3	Q03306	898 aa	Predicted RBP	7.12	□□□□□ -1.27
SHE1	YBL031W	ARG8	P18544	423 aa		7.1	□□□□□ -1.27
SHE1	YBL031W	YPR204W	Q08995	1032 aa		7.1	□□□□□ -1.27
SHE1	YBL031W	KTR1	P27810	393 aa	Known RBP	7.09	□□□□□ -1.27
SHE1	YBL031W	OSH7	P38755	437 aa		7.09	□□□□□ -1.27
SHE1	YBL031W	ROG3	P43602	733 aa		7.09	□□□□□ -1.27
SHE1	YBL031W	EMW1	P42842	904 aa	Known RBP	7.08	□□□□□ -1.28
SHE1	YBL031W	PKC1	P24583	1151 aa		7.07	□□□□□ -1.28
SHE1	YBL031W	RSC30	P38781	883 aa		7.07	□□□□□ -1.28
SHE1	YBL031W	TY1A-MR1	Q04215	440 aa		7.07	□□□□□ -1.28
SHE1	YBL031W	DFG5	Q05031	458 aa		7.06	□□□□□ -1.28
SHE1	YBL031W	MKS1	P34072	584 aa		7.05	□□□□□ -1.28
SHE1	YBL031W	ICP55	P40051	511 aa		7.05	□□□□□ -1.28
SHE1	YBL031W	PUS1	Q12211	544 aa	Known RBP	7.04	□□□□□ -1.28
SHE1	YBL031W	YBL036C	P38197	257 aa		7.03	□□□□□ -1.28
SHE1	YBL031W	DPH6	Q12429	685 aa		7.03	□□□□□ -1.28
SHE1	YBL031W	CSE4	P36012	229 aa		7.01	□□□□□ -1.29
SHE1	YBL031W	BIM1	P40013	344 aa		7.01	□□□□□ -1.29
SHE1	YBL031W	RPL34B	P40525	121 aa	Known RBP	7.01	□□□□□ -1.29
SHE1	YBL031W	FIG4	P42837	879 aa		7.01	□□□□□ -1.29
SHE1	YBL031W	YJL007C	P47080	104 aa		7.01	□□□□□ -1.29
SHE1	YBL031W	BDS1	Q08347	646 aa		7.01	□□□□□ -1.29
SHE1	YBL031W	RAD59	Q12223	238 aa		7.01	□□□□□ -1.29
SHE1	YBL031W	CCP1	P00431	361 aa		6.99	□□□□□ -1.29
SHE1	YBL031W	MDJ1	P35191	511 aa		6.99	□□□□□ -1.29
SHE1	YBL031W	LSB3	P43603	459 aa	Known RBP	6.99	□□□□□ -1.29
SHE1	YBL031W	LYS5	P50113	272 aa		6.98	□□□□□ -1.29
SHE1	YBL031W	SPT5	P27692	1063 aa	Known RBP	6.97	□□□□□ -1.29
SHE1	YBL031W	ATG32	P40458	529 aa		6.97	□□□□□ -1.29
SHE1	YBL031W	TEC1	P18412	486 aa		6.96	□□□□□ -1.3
SHE1	YBL031W	BIO2	P32451	375 aa		6.96	□□□□□ -1.3
SHE1	YBL031W	TIF1	P10081	395 aa	Known RBP	6.94	□□□□□ -1.3
SHE1	YBL031W	FBP26	P32604	452 aa		6.94	□□□□□ -1.3
SHE1	YBL031W	PHM7	Q12252	991 aa		6.94	□□□□□ -1.3
SHE1	YBL031W	NSG2	P53898	299 aa		6.93	□□□□□ -1.3
SHE1	YBL031W	NAM8	Q00539	523 aa	Known RBP	6.93	□□□□□ -1.3
SHE1	YBL031W	JJJ3	P47138	172 aa		6.92	□□□□□ -1.3
SHE1	YBL031W	THI72	Q08579	599 aa		6.92	□□□□□ -1.3
SHE1	YBL031W	CDC19	P00549	500 aa	Known RBP	6.91	□□□□□ -1.3
SHE1	YBL031W	SSA1	P10591	642 aa	Known RBP	6.91	□□□□□ -1.3
SHE1	YBL031W	MAK16	P10962	306 aa	Predicted RBP	6.91	□□□□□ -1.3
SHE1	YBL031W	SSA4	P22202	642 aa	Known RBP	6.91	□□□□□ -1.3
SHE1	YBL031W	STE6	P12866	1290 aa		6.89	□□□□□ -1.31
SHE1	YBL031W	SIS2	P36024	562 aa		6.89	□□□□□ -1.31
SHE1	YBL031W	SUB2	Q07478	446 aa	Known RBP	6.89	□□□□□ -1.31
SHE1	YBL031W	SUP45	P12385	437 aa	Known RBP	6.88	□□□□□ -1.31
SHE1	YBL031W	RTG2	P32608	588 aa	Known RBP	6.88	□□□□□ -1.31
SHE1	YBL031W	NAF1	P53919	492 aa	Known RBP	6.88	□□□□□ -1.31
SHE1	YBL031W	YNL108C	P53929	270 aa		6.88	□□□□□ -1.31
SHE1	YBL031W	CUZ1	P53899	274 aa		6.87	□□□□□ -1.31
SHE1	YBL031W	ATG20	Q07528	640 aa		6.87	□□□□□ -1.31
SHE1	YBL031W	DLD3	P39976	496 aa	Known RBP	6.86	□□□□□ -1.31
SHE1	YBL031W	YPP1	P46951	817 aa		6.86	□□□□□ -1.31
SHE1	YBL031W	YPR084W	Q06821	456 aa		6.86	□□□□□ -1.31
SHE1	YBL031W	GUT2	P32191	649 aa		6.85	□□□□□ -1.31
SHE1	YBL031W	GEF1	P37020	779 aa		6.85	□□□□□ -1.31
SHE1	YBL031W	CEM1	P39525	442 aa		6.85	□□□□□ -1.31
SHE1	YBL031W	ISU1	Q03020	165 aa		6.85	□□□□□ -1.31
SHE1	YBL031W	AI1	P03875	834 aa		6.84	□□□□□ -1.31
SHE1	YBL031W	TTI1	P36097	1038 aa		6.84	□□□□□ -1.31
SHE1	YBL031W	ENO2	P00925	437 aa	Known RBP	6.83	□□□□□ -1.32
SHE1	YBL031W	RIM21	P48565	533 aa		6.83	□□□□□ -1.32
SHE1	YBL031W	VTC4	P47075	721 aa		6.82	□□□□□ -1.32
SHE1	YBL031W	RPP2B	P02400	110 aa	Known RBP	6.81	□□□□□ -1.32
SHE1	YBL031W	YDJ1	P25491	409 aa	Known RBP	6.81	□□□□□ -1.32
SHE1	YBL031W	CPS1	P27614	576 aa		6.81	□□□□□ -1.32
SHE1	YBL031W	DAL1	P32375	460 aa		6.81	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms