RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
UBE3A-227ENST00000638011 H3BQV1 296 aa18.5■□□□□ 0.55
UBE3A-227ENST00000638011 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
UBE3A-227ENST00000638011 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
UBE3A-227ENST00000638011 MNS1Q8NEH6 495 aa18.49■□□□□ 0.55
UBE3A-227ENST00000638011 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
UBE3A-227ENST00000638011 REC8O95072 547 aa18.47■□□□□ 0.55
UBE3A-227ENST00000638011 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
UBE3A-227ENST00000638011 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
UBE3A-227ENST00000638011 PES1O00541 588 aaKnown RBP18.47■□□□□ 0.55
UBE3A-227ENST00000638011 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.55
UBE3A-227ENST00000638011 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
UBE3A-227ENST00000638011 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
UBE3A-227ENST00000638011 MRE11P49959 708 aa18.45■□□□□ 0.54
UBE3A-227ENST00000638011 KIAA0754O94854 1291 aa18.45■□□□□ 0.54
UBE3A-227ENST00000638011 ZNF592Q92610 1267 aa18.45■□□□□ 0.54
UBE3A-227ENST00000638011 CCDC47Q96A33 483 aaKnown RBP18.44■□□□□ 0.54
UBE3A-227ENST00000638011 KANK1Q14678 1352 aa18.44■□□□□ 0.54
UBE3A-227ENST00000638011 NUCB2P80303 420 aa18.44■□□□□ 0.54
UBE3A-227ENST00000638011 AAMPQ13685 434 aa18.44■□□□□ 0.54
UBE3A-227ENST00000638011 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
UBE3A-227ENST00000638011 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
UBE3A-227ENST00000638011 CPLX2Q6PUV4 134 aaKnown RBP18.41■□□□□ 0.54
UBE3A-227ENST00000638011 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
UBE3A-227ENST00000638011 NASPP49321 788 aaPredicted RBP18.4■□□□□ 0.54
UBE3A-227ENST00000638011 POGKQ9P215 609 aa18.4■□□□□ 0.54
UBE3A-227ENST00000638011 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
UBE3A-227ENST00000638011 GOLGA6L10A6NI86 522 aa18.4■□□□□ 0.54
UBE3A-227ENST00000638011 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
UBE3A-227ENST00000638011 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.54
UBE3A-227ENST00000638011 FAM184AQ8NB25 1140 aa18.39■□□□□ 0.54
UBE3A-227ENST00000638011 EIF3JO75822 258 aaKnown RBP18.39■□□□□ 0.53
UBE3A-227ENST00000638011 CGNL1Q0VF96 1302 aa18.39■□□□□ 0.53
UBE3A-227ENST00000638011 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
UBE3A-227ENST00000638011 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
UBE3A-227ENST00000638011 PDCL2Q8N4E4 241 aa18.38■□□□□ 0.53
UBE3A-227ENST00000638011 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
UBE3A-227ENST00000638011 TXLNBQ8N3L3 684 aa18.38■□□□□ 0.53
UBE3A-227ENST00000638011 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
UBE3A-227ENST00000638011 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
UBE3A-227ENST00000638011 ANO8Q9HCE9 1232 aaPredicted RBP18.37■□□□□ 0.53
UBE3A-227ENST00000638011 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
UBE3A-227ENST00000638011 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
UBE3A-227ENST00000638011 MORC1Q86VD1 984 aa18.37■□□□□ 0.53
UBE3A-227ENST00000638011 SASS6Q6UVJ0 657 aa18.36■□□□□ 0.53
UBE3A-227ENST00000638011 FAM107BQ9H098 131 aa18.35■□□□□ 0.53
UBE3A-227ENST00000638011 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
UBE3A-227ENST00000638011 GORABQ5T7V8 394 aa18.35■□□□□ 0.53
UBE3A-227ENST00000638011 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
UBE3A-227ENST00000638011 AKAP17AQ02040 695 aaKnown RBP18.35■□□□□ 0.53
UBE3A-227ENST00000638011 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
UBE3A-227ENST00000638011 ERLIN2O94905 339 aa18.34■□□□□ 0.53
UBE3A-227ENST00000638011 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
UBE3A-227ENST00000638011 IQCEQ6IPM2 695 aa18.34■□□□□ 0.53
UBE3A-227ENST00000638011 RABEP1Q15276 862 aa18.34■□□□□ 0.53
UBE3A-227ENST00000638011 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.53
UBE3A-227ENST00000638011 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.53
UBE3A-227ENST00000638011 SETD5Q9C0A6 1442 aa18.33■□□□□ 0.52
UBE3A-227ENST00000638011 MBD3O95983 291 aa18.32■□□□□ 0.52
UBE3A-227ENST00000638011 TMX4Q9H1E5 349 aaPredicted RBP18.32■□□□□ 0.52
UBE3A-227ENST00000638011 HSP90AB3PQ58FF7 597 aa18.32■□□□□ 0.52
UBE3A-227ENST00000638011 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
UBE3A-227ENST00000638011 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
UBE3A-227ENST00000638011 ZBED9Q6R2W3 1325 aa18.31■□□□□ 0.52
UBE3A-227ENST00000638011 ZKSCAN1P17029 563 aaPredicted RBP18.31■□□□□ 0.52
UBE3A-227ENST00000638011 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
UBE3A-227ENST00000638011 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
UBE3A-227ENST00000638011 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
UBE3A-227ENST00000638011 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
UBE3A-227ENST00000638011 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
UBE3A-227ENST00000638011 ERLIN1O75477 346 aa18.3■□□□□ 0.52
UBE3A-227ENST00000638011 PDE4AP27815 886 aa18.3■□□□□ 0.52
UBE3A-227ENST00000638011 TRIM29Q14134 588 aa18.3■□□□□ 0.52
UBE3A-227ENST00000638011 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
UBE3A-227ENST00000638011 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
UBE3A-227ENST00000638011 ODF2Q5BJF6 829 aa18.29■□□□□ 0.52
UBE3A-227ENST00000638011 NLRP13Q86W25 1043 aa18.29■□□□□ 0.52
UBE3A-227ENST00000638011 MARCH6O60337 910 aa18.28■□□□□ 0.52
UBE3A-227ENST00000638011 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.52
UBE3A-227ENST00000638011 PCMTD1Q96MG8 357 aaPredicted RBP18.27■□□□□ 0.52
UBE3A-227ENST00000638011 KIF15Q9NS87 1388 aa18.27■□□□□ 0.52
UBE3A-227ENST00000638011 EZRP15311 586 aaKnown RBP18.27■□□□□ 0.51
UBE3A-227ENST00000638011 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.51
UBE3A-227ENST00000638011 SMARCE1Q969G3 411 aa18.27■□□□□ 0.51
UBE3A-227ENST00000638011 CT47A1Q5JQC4 288 aaPredicted RBP18.25■□□□□ 0.51
UBE3A-227ENST00000638011 OLFM4Q6UX06 510 aa18.25■□□□□ 0.51
UBE3A-227ENST00000638011 CCDC73Q6ZRK6 1079 aa18.25■□□□□ 0.51
UBE3A-227ENST00000638011 GIMAP7Q8NHV1 300 aa18.24■□□□□ 0.51
UBE3A-227ENST00000638011 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
UBE3A-227ENST00000638011 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
UBE3A-227ENST00000638011 AXDND1Q5T1B0 1012 aaPredicted RBP18.23■□□□□ 0.51
UBE3A-227ENST00000638011 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
UBE3A-227ENST00000638011 CALCOCO1Q9P1Z2 691 aa18.23■□□□□ 0.51
UBE3A-227ENST00000638011 PDE4CQ08493 712 aa18.23■□□□□ 0.51
UBE3A-227ENST00000638011 PDCP20941 246 aa18.22■□□□□ 0.51
UBE3A-227ENST00000638011 ABCC9O60706 1549 aa18.22■□□□□ 0.51
UBE3A-227ENST00000638011 TCEAL9Q9UHQ7 104 aa18.22■□□□□ 0.51
UBE3A-227ENST00000638011 PDIA4P13667 645 aaKnown RBP18.22■□□□□ 0.51
UBE3A-227ENST00000638011 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
UBE3A-227ENST00000638011 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms