RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PCF11O94913 1555 aaKnown RBP7.42□□□□□ -1.22
CHD2-227ENST00000637572 KNSTRNQ9Y448 316 aa7.42□□□□□ -1.22
CHD2-227ENST00000637572 ROCK1Q13464 1354 aa7.42□□□□□ -1.22
CHD2-227ENST00000637572 DHX57Q6P158 1386 aaKnown RBP7.42□□□□□ -1.22
CHD2-227ENST00000637572 PLB1Q6P1J6 1458 aa7.42□□□□□ -1.22
CHD2-227ENST00000637572 EID1Q9Y6B2 187 aa7.41□□□□□ -1.22
CHD2-227ENST00000637572 KIF14Q15058 1648 aa7.41□□□□□ -1.22
CHD2-227ENST00000637572 WDR43Q15061 677 aaKnown RBP eCLIP7.41□□□□□ -1.221e-6■■□□□ 11.8
CHD2-227ENST00000637572 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
CHD2-227ENST00000637572 C9orf84Q5VXU9 1444 aa7.41□□□□□ -1.22
CHD2-227ENST00000637572 CFAP53Q96M91 514 aa7.4□□□□□ -1.22
CHD2-227ENST00000637572 HFM1A2PYH4 1435 aa7.4□□□□□ -1.22
CHD2-227ENST00000637572 PLEKHG5O94827 1062 aa7.4□□□□□ -1.22
CHD2-227ENST00000637572 ZNF644Q9H582 1327 aaPredicted RBP7.4□□□□□ -1.23
CHD2-227ENST00000637572 SOCS7O14512 581 aa7.4□□□□□ -1.23
CHD2-227ENST00000637572 VGFO15240 615 aaPredicted RBP7.4□□□□□ -1.23
CHD2-227ENST00000637572 ARXQ96QS3 562 aa7.4□□□□□ -1.23
CHD2-227ENST00000637572 ARID3AQ99856 593 aa7.4□□□□□ -1.23
CHD2-227ENST00000637572 TARBP1Q13395 1621 aaKnown RBP7.4□□□□□ -1.23
CHD2-227ENST00000637572 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
CHD2-227ENST00000637572 CDK13Q14004 1512 aaKnown RBP7.39□□□□□ -1.23
CHD2-227ENST00000637572 ZNF692Q9BU19 519 aaPredicted RBP7.39□□□□□ -1.23
CHD2-227ENST00000637572 ROCK2O75116 1388 aaKnown RBP7.39□□□□□ -1.23
CHD2-227ENST00000637572 MRS2Q9HD23 443 aa7.39□□□□□ -1.23
CHD2-227ENST00000637572 CCDC141Q6ZP82 1450 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 PBRM1Q86U86 1689 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 DAPK1P53355 1430 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 RAPGEF6Q8TEU7 1601 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 ERICH6Q7L0X2 663 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 L3MBTL2Q969R5 705 aa7.38□□□□□ -1.23
CHD2-227ENST00000637572 SCAPERQ9BY12 1400 aa7.37□□□□□ -1.23
CHD2-227ENST00000637572 A0A0G2JS52 829 aa7.37□□□□□ -1.23
CHD2-227ENST00000637572 MYT1Q01538 1121 aa7.37□□□□□ -1.23
CHD2-227ENST00000637572 MEX3CQ5U5Q3 659 aaKnown RBP7.37□□□□□ -1.23
CHD2-227ENST00000637572 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.37□□□□□ -1.23
CHD2-227ENST00000637572 AFAP1Q8N556 730 aa7.37□□□□□ -1.23
CHD2-227ENST00000637572 STK25O00506 426 aa7.37□□□□□ -1.23
CHD2-227ENST00000637572 POGZQ7Z3K3 1410 aa7.36□□□□□ -1.23
CHD2-227ENST00000637572 CANXP27824 592 aaKnown RBP7.36□□□□□ -1.23
CHD2-227ENST00000637572 TMEM132AQ24JP5 1023 aa7.36□□□□□ -1.23
CHD2-227ENST00000637572 ZBTB47Q9UFB7 747 aaPredicted RBP7.35□□□□□ -1.23
CHD2-227ENST00000637572 KDM4FA0A1W2PPD8 638 aa7.35□□□□□ -1.23
CHD2-227ENST00000637572 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD2-227ENST00000637572 PNNQ9H307 717 aaKnown RBP7.35□□□□□ -1.23
CHD2-227ENST00000637572 NUDCQ9Y266 331 aa7.35□□□□□ -1.23
CHD2-227ENST00000637572 AKNAQ7Z591 1439 aa7.35□□□□□ -1.23
CHD2-227ENST00000637572 HSPA5P11021 654 aaKnown RBP7.35□□□□□ -1.23
CHD2-227ENST00000637572 ATP10BO94823 1461 aa7.34□□□□□ -1.23
CHD2-227ENST00000637572 FAM9BQ8IZU0 186 aa7.34□□□□□ -1.23
CHD2-227ENST00000637572 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.34□□□□□ -1.23
CHD2-227ENST00000637572 NUP153P49790 1475 aaKnown RBP7.34□□□□□ -1.23
CHD2-227ENST00000637572 CAMSAP2Q08AD1 1489 aa7.34□□□□□ -1.23
CHD2-227ENST00000637572 TEX14Q8IWB6 1497 aa7.34□□□□□ -1.23
CHD2-227ENST00000637572 HDGFL2Q7Z4V5 671 aaPredicted RBP7.34□□□□□ -1.23
CHD2-227ENST00000637572 CERKQ8TCT0 537 aa7.33□□□□□ -1.24
CHD2-227ENST00000637572 HIRIP3Q9BW71 556 aaPredicted RBP7.33□□□□□ -1.24
CHD2-227ENST00000637572 ADGRL1O94910 1474 aa7.33□□□□□ -1.24
CHD2-227ENST00000637572 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
CHD2-227ENST00000637572 SLC52A1Q9NWF4 448 aa7.33□□□□□ -1.24
CHD2-227ENST00000637572 PTPN23Q9H3S7 1636 aa7.33□□□□□ -1.24
CHD2-227ENST00000637572 PLCH2O75038 1416 aa7.33□□□□□ -1.24
CHD2-227ENST00000637572 KIAA1107Q9UPP5 1409 aa7.33□□□□□ -1.24
CHD2-227ENST00000637572 ABCC2Q92887 1545 aa7.32□□□□□ -1.24
CHD2-227ENST00000637572 CCER2I3L3R5 266 aa7.32□□□□□ -1.24
CHD2-227ENST00000637572 WDR7Q9Y4E6 1490 aa7.32□□□□□ -1.24
CHD2-227ENST00000637572 DISP1Q96F81 1524 aa7.32□□□□□ -1.24
CHD2-227ENST00000637572 DENND4BO75064 1496 aaPredicted RBP7.32□□□□□ -1.24
CHD2-227ENST00000637572 FANCAO15360 1455 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 RIMBP3CA6NJZ7 1639 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 RIMBP3BA6NNM3 1639 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 RIMBP3Q9UFD9 1639 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 ABCC5O15440 1437 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 ASXL2Q76L83 1435 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 NEUROD2Q15784 382 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 TERF2IPQ9NYB0 399 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 GPATCH8Q9UKJ3 1502 aaKnown RBP7.31□□□□□ -1.24
CHD2-227ENST00000637572 SAMD9Q5K651 1589 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 NAIPQ13075 1403 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 RALBP1Q15311 655 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
CHD2-227ENST00000637572 RPGRIP1LQ68CZ1 1315 aa7.3□□□□□ -1.24
CHD2-227ENST00000637572 KTN1Q86UP2 1357 aaKnown RBP7.3□□□□□ -1.24
CHD2-227ENST00000637572 CEP170Q5SW79 1584 aa7.29□□□□□ -1.24
CHD2-227ENST00000637572 DCAF8Q5TAQ9 597 aa7.29□□□□□ -1.24
CHD2-227ENST00000637572 NCOA1Q15788 1441 aa7.29□□□□□ -1.24
CHD2-227ENST00000637572 STK26Q9P289 416 aa7.29□□□□□ -1.24
CHD2-227ENST00000637572 UHRF1BP1LA0JNW5 1464 aa7.28□□□□□ -1.24
CHD2-227ENST00000637572 RAPGEF3O95398 923 aa7.28□□□□□ -1.24
CHD2-227ENST00000637572 EVC2Q86UK5 1308 aa7.28□□□□□ -1.24
CHD2-227ENST00000637572 CFAP43Q8NDM7 1665 aa7.27□□□□□ -1.24
CHD2-227ENST00000637572 MORC1Q86VD1 984 aa7.27□□□□□ -1.25
CHD2-227ENST00000637572 MAPK8IP3Q9UPT6 1336 aa7.27□□□□□ -1.25
CHD2-227ENST00000637572 TCOF1Q13428 1488 aaKnown RBP7.27□□□□□ -1.25
CHD2-227ENST00000637572 ANKRD30BQ9BXX2 1392 aa7.27□□□□□ -1.25
CHD2-227ENST00000637572 TOM1O60784 492 aa7.27□□□□□ -1.25
CHD2-227ENST00000637572 DHX29Q7Z478 1369 aaKnown RBP7.27□□□□□ -1.25
CHD2-227ENST00000637572 ZNF518AQ6AHZ1 1483 aa7.27□□□□□ -1.25
CHD2-227ENST00000637572 USP47Q96K76 1375 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms