RNA–Protein interactions for RNA: ENST00000636773.1

CACNB4-233, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 4,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-233	ENST00000636773	CFAP53	Q96M91	514 aa		5.86	□□□□□ -1.47
CACNB4-233	ENST00000636773	RAPGEF2	Q9Y4G8	1499 aa		5.86	□□□□□ -1.47
CACNB4-233	ENST00000636773	MYCN	P04198	464 aa	Predicted RBP	5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	AMPH	P49418	695 aa		5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	SLC4A2	P04920	1241 aa		5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	ANKRD30A	Q9BXX3	1397 aa		5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	KDM5B	Q9UGL1	1544 aa		5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	LAMC3	Q9Y6N6	1575 aa		5.85	□□□□□ -1.47
CACNB4-233	ENST00000636773	ZNF316	A6NFI3	1004 aa	Predicted RBP	5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	HMGB2	P26583	209 aa	Known RBP	5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	SECISBP2L	Q93073	1101 aa	Known RBP	5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	PRDM11	Q9NQV5	511 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	NUP155	O75694	1391 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	SYNJ2	O15056	1496 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	TOP2A	P11388	1531 aa	Known RBP	5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	UNC13A	Q9UPW8	1703 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	NBPF8	Q3BBV2	869 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	NBPF14	Q5TI25	921 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	CNPY4	Q8N129	248 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	DCAF11	Q8TEB1	546 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	CFAP43	Q8NDM7	1665 aa		5.84	□□□□□ -1.47
CACNB4-233	ENST00000636773	FOXD4L1	Q9NU39	408 aa		5.84	□□□□□ -1.48
CACNB4-233	ENST00000636773	TNNT2	P45379	298 aa	Predicted RBP	5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	NOP58	Q9Y2X3	529 aa	Known RBP	5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	FANCI	Q9NVI1	1328 aa		5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	CFTR	P13569	1480 aa		5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	CCDC18	Q5T9S5	1454 aa		5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	TEX14	Q8IWB6	1497 aa		5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	C8orf37	Q96NL8	207 aa		5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	NUDC	Q9Y266	331 aa		5.83	□□□□□ -1.48
CACNB4-233	ENST00000636773	FHOD3	Q2V2M9	1422 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	SCAPER	Q9BY12	1400 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	HSP90AA1	P07900	732 aa	Known RBP	5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	PKD2	Q13563	968 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	TOPBP1	Q92547	1522 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	AKNA	Q7Z591	1439 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	GPRASP1	Q5JY77	1395 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	CADPS2	Q86UW7	1296 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	WWC1	Q8IX03	1113 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	IPO4	Q8TEX9	1081 aa	Known RBP	5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	CARD11	Q9BXL7	1154 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	NLRP2	Q9NX02	1062 aa		5.82	□□□□□ -1.48
CACNB4-233	ENST00000636773	WASHC2A	Q641Q2	1341 aa		5.81	□□□□□ -1.48
CACNB4-233	ENST00000636773	HMGXB3	Q12766	1538 aa		5.81	□□□□□ -1.48
CACNB4-233	ENST00000636773	C11orf95	C9JLR9	678 aa	Predicted RBP	5.81	□□□□□ -1.48
CACNB4-233	ENST00000636773	WDR43	Q15061	677 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
CACNB4-233	ENST00000636773	UACA	Q9BZF9	1416 aa		5.81	□□□□□ -1.48
CACNB4-233	ENST00000636773	KNSTRN	Q9Y448	316 aa		5.81	□□□□□ -1.48
CACNB4-233	ENST00000636773	PLB1	Q6P1J6	1458 aa		5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	VGLL3	A8MV65	326 aa		5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	U2SURP	O15042	1029 aa	Known RBP	5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	RTF1	Q92541	710 aa	Known RBP	5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	TRAK1	Q9UPV9	953 aa		5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773		U3KPZ7	1027 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	TERF2IP	Q9NYB0	399 aa		5.8	□□□□□ -1.48
CACNB4-233	ENST00000636773	ERICH3	Q5RHP9	1530 aa		5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	WIZ	O95785	1651 aa		5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	RAPGEF4	Q8WZA2	1011 aa		5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	IGF1R	P08069	1367 aa		5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	MSH6	P52701	1360 aa		5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	PATL2	C9JE40	543 aa	Known RBP	5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	RBM33	Q96EV2	1170 aa	Known RBP	5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	ZRANB1	Q9UGI0	708 aa		5.79	□□□□□ -1.48
CACNB4-233	ENST00000636773	MAPK8IP3	Q9UPT6	1336 aa		5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	POLA1	P09884	1462 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	TOM1L2	Q6ZVM7	507 aa		5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	MINK1	Q8N4C8	1332 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	MAGI1	Q96QZ7	1491 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	HSP90B1	P14625	803 aa	Known RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	FTSJ3	Q8IY81	847 aa	Known RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	RRP9	O43818	475 aa	Known RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	NUTM2G	Q5VZR2	741 aa		5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	STAC3	Q96MF2	364 aa		5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	ISY1	Q9ULR0	285 aa	Known RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	ZNF608	Q9ULD9	1512 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNB4-233	ENST00000636773	NCL	P19338	710 aa	Known RBP	5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	SLC52A1	Q9NWF4	448 aa		5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	LAS1L	Q9Y4W2	734 aa	Known RBP	5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	BAG6	P46379	1132 aa		5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	BICRA	Q9NZM4	1560 aa		5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	XPC	Q01831	940 aa	Predicted RBP	5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773		E9PCH4	1651 aa		5.77	□□□□□ -1.49
CACNB4-233	ENST00000636773	ANP32C	O43423	234 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	NLRP6	P59044	892 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	CEP162	Q5TB80	1403 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	DENND4B	O75064	1496 aa	Predicted RBP	5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	NCKAP5L	Q9HCH0	1330 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	CERK	Q8TCT0	537 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	MAPKBP1	O60336	1514 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	POLD1	P28340	1107 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	C1orf141	Q5JVX7	400 aa		5.76	□□□□□ -1.49
CACNB4-233	ENST00000636773	ARHGAP5	Q13017	1502 aa		5.75	□□□□□ -1.49
CACNB4-233	ENST00000636773	ABTB2	Q8N961	1025 aa		5.75	□□□□□ -1.49
CACNB4-233	ENST00000636773	UHRF1BP1	Q6BDS2	1440 aa		5.75	□□□□□ -1.49
CACNB4-233	ENST00000636773	PMFBP1	Q8TBY8	1022 aa		5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms