RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 MLECQ14165 292 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 KIF14Q15058 1648 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 TMX4Q9H1E5 349 aaPredicted RBP8.58□□□□□ -1.04
TCF4-278ENST00000636400 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
TCF4-278ENST00000636400 TIAM1Q13009 1591 aa8.58□□□□□ -1.04
TCF4-278ENST00000636400 SENP3Q9H4L4 574 aaPredicted RBP8.58□□□□□ -1.04
TCF4-278ENST00000636400 DNTTIP2Q5QJE6 756 aaKnown RBP8.57□□□□□ -1.04
TCF4-278ENST00000636400 EVC2Q86UK5 1308 aa8.57□□□□□ -1.04
TCF4-278ENST00000636400 U2AF1L5P0DN76 240 aaPredicted RBP8.57□□□□□ -1.04
TCF4-278ENST00000636400 U2AF1Q01081 240 aaKnown RBP eCLIP8.57□□□□□ -1.04
TCF4-278ENST00000636400 SYAP1Q96A49 352 aaPredicted RBP8.57□□□□□ -1.04
TCF4-278ENST00000636400 MIA2Q96PC5 1412 aa8.57□□□□□ -1.04
TCF4-278ENST00000636400 CHMP4CQ96CF2 233 aa8.57□□□□□ -1.04
TCF4-278ENST00000636400 TCERG1O14776 1098 aaKnown RBP8.56□□□□□ -1.04
TCF4-278ENST00000636400 GBP4Q96PP9 640 aa8.56□□□□□ -1.04
TCF4-278ENST00000636400 PEG3Q9GZU2 1588 aa8.56□□□□□ -1.04
TCF4-278ENST00000636400 STK26Q9P289 416 aa8.56□□□□□ -1.04
TCF4-278ENST00000636400 MYBBP1AQ9BQG0 1328 aaKnown RBP8.55□□□□□ -1.04
TCF4-278ENST00000636400 USP47Q96K76 1375 aa8.55□□□□□ -1.04
TCF4-278ENST00000636400 PAK3O75914 559 aaPredicted RBP8.55□□□□□ -1.04
TCF4-278ENST00000636400 HNRNPMP52272 730 aaKnown RBP eCLIP8.55□□□□□ -1.047e-6■■■□□ 17
TCF4-278ENST00000636400 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
TCF4-278ENST00000636400 ROCK1Q13464 1354 aa8.54□□□□□ -1.04
TCF4-278ENST00000636400 GNL2Q13823 731 aaKnown RBP8.54□□□□□ -1.04
TCF4-278ENST00000636400 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
TCF4-278ENST00000636400 TOPBP1Q92547 1522 aa8.54□□□□□ -1.04
TCF4-278ENST00000636400 KIF3AQ9Y496 699 aa8.53□□□□□ -1.04
TCF4-278ENST00000636400 SAFB2Q14151 953 aaKnown RBP eCLIP8.53□□□□□ -1.04
TCF4-278ENST00000636400 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
TCF4-278ENST00000636400 L3MBTL2Q969R5 705 aa8.53□□□□□ -1.04
TCF4-278ENST00000636400 NCOA2Q15596 1464 aa8.52□□□□□ -1.04
TCF4-278ENST00000636400 ITPRIPQ8IWB1 547 aa8.52□□□□□ -1.05
TCF4-278ENST00000636400 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
TCF4-278ENST00000636400 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.05
TCF4-278ENST00000636400 PHF14O94880 888 aa8.52□□□□□ -1.05
TCF4-278ENST00000636400 FOXD1Q16676 465 aa8.52□□□□□ -1.05
TCF4-278ENST00000636400 NGDNQ8NEJ9 315 aaKnown RBP8.52□□□□□ -1.05
TCF4-278ENST00000636400 NAP1L2Q9ULW6 460 aaPredicted RBP8.51□□□□□ -1.05
TCF4-278ENST00000636400 PTPN23Q9H3S7 1636 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 CSB-PGBD3P0DP91 1061 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 SMC4Q9NTJ3 1288 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 AAMPQ13685 434 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 IGF1RP08069 1367 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 B4GALNT3Q6L9W6 998 aa8.51□□□□□ -1.05
TCF4-278ENST00000636400 ZBED9Q6R2W3 1325 aa8.5□□□□□ -1.05
TCF4-278ENST00000636400 MSNP26038 577 aaKnown RBP8.5□□□□□ -1.05
TCF4-278ENST00000636400 AMPHP49418 695 aa8.5□□□□□ -1.05
TCF4-278ENST00000636400 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
TCF4-278ENST00000636400 KIAA2012Q0VF49 1180 aa8.5□□□□□ -1.05
TCF4-278ENST00000636400 THOC2Q8NI27 1593 aaKnown RBP8.49□□□□□ -1.05
TCF4-278ENST00000636400 ANKRD50Q9ULJ7 1429 aa8.49□□□□□ -1.05
TCF4-278ENST00000636400 SOX12O15370 315 aa8.49□□□□□ -1.05
TCF4-278ENST00000636400 TPM4P67936 248 aa8.49□□□□□ -1.05
TCF4-278ENST00000636400 E9PSI1 815 aa8.48□□□□□ -1.05
TCF4-278ENST00000636400 HFM1A2PYH4 1435 aa8.48□□□□□ -1.05
TCF4-278ENST00000636400 GORABQ5T7V8 394 aa8.48□□□□□ -1.05
TCF4-278ENST00000636400 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
TCF4-278ENST00000636400 COG3Q96JB2 828 aa8.48□□□□□ -1.05
TCF4-278ENST00000636400 MAP3K1Q13233 1512 aa8.48□□□□□ -1.05
TCF4-278ENST00000636400 ST18O60284 1047 aa8.48□□□□□ -1.05
TCF4-278ENST00000636400 PBRM1Q86U86 1689 aa8.47□□□□□ -1.05
TCF4-278ENST00000636400 TAF7LQ5H9L4 462 aa8.47□□□□□ -1.05
TCF4-278ENST00000636400 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
TCF4-278ENST00000636400 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
TCF4-278ENST00000636400 POLA1P09884 1462 aaPredicted RBP8.47□□□□□ -1.05
TCF4-278ENST00000636400 MAGI1Q96QZ7 1491 aaPredicted RBP8.47□□□□□ -1.05
TCF4-278ENST00000636400 CNTLNQ9NXG0 1405 aa8.47□□□□□ -1.05
TCF4-278ENST00000636400 BICRAQ9NZM4 1560 aa8.47□□□□□ -1.05
TCF4-278ENST00000636400 NESP48681 1621 aa8.46□□□□□ -1.05
TCF4-278ENST00000636400 PCF11O94913 1555 aaKnown RBP8.46□□□□□ -1.05
TCF4-278ENST00000636400 AQRO60306 1485 aaKnown RBP eCLIP8.46□□□□□ -1.05
TCF4-278ENST00000636400 CENPQQ7L2Z9 268 aaPredicted RBP8.46□□□□□ -1.06
TCF4-278ENST00000636400 ATP6V1DQ9Y5K8 247 aa8.46□□□□□ -1.06
TCF4-278ENST00000636400 CCDC141Q6ZP82 1450 aa8.46□□□□□ -1.06
TCF4-278ENST00000636400 WWC1Q8IX03 1113 aa8.46□□□□□ -1.06
TCF4-278ENST00000636400 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
TCF4-278ENST00000636400 DRC7Q8IY82 874 aa8.45□□□□□ -1.06
TCF4-278ENST00000636400 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
TCF4-278ENST00000636400 C9orf84Q5VXU9 1444 aa8.45□□□□□ -1.06
TCF4-278ENST00000636400 ST20-MTHFSA0A0A6YYL1 179 aa8.45□□□□□ -1.06
TCF4-278ENST00000636400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.45□□□□□ -1.06
TCF4-278ENST00000636400 CFAP43Q8NDM7 1665 aa8.44□□□□□ -1.06
TCF4-278ENST00000636400 PLCB2Q00722 1185 aa8.44□□□□□ -1.06
TCF4-278ENST00000636400 NEXNQ0ZGT2 675 aa8.44□□□□□ -1.06
TCF4-278ENST00000636400 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
TCF4-278ENST00000636400 TRIM6-TRIM34B2RNG4 842 aa8.44□□□□□ -1.06
TCF4-278ENST00000636400 KIF16BQ96L93 1317 aa8.44□□□□□ -1.06
TCF4-278ENST00000636400 PRXQ9BXM0 1461 aa8.43□□□□□ -1.06
TCF4-278ENST00000636400 WASHC2AQ641Q2 1341 aa8.43□□□□□ -1.06
TCF4-278ENST00000636400 TROQ12816 1431 aaPredicted RBP8.43□□□□□ -1.06
TCF4-278ENST00000636400 FAM135AQ9P2D6 1515 aa8.43□□□□□ -1.06
TCF4-278ENST00000636400 DAPK1P53355 1430 aa8.43□□□□□ -1.06
TCF4-278ENST00000636400 ADGBQ8N7X0 1667 aa8.42□□□□□ -1.06
TCF4-278ENST00000636400 PANK3Q9H999 370 aa8.42□□□□□ -1.06
TCF4-278ENST00000636400 CHMP3Q9Y3E7 222 aa8.42□□□□□ -1.06
TCF4-278ENST00000636400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.06
TCF4-278ENST00000636400 DDX11L8A8MPP1 907 aa8.42□□□□□ -1.06
TCF4-278ENST00000636400 DDX19BQ9UMR2 479 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms