RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 PES1O00541 588 aaKnown RBP11.3□□□□□ -0.6
CSMD1-218ENST00000635120 CCAR2Q8N163 923 aaKnown RBP11.3□□□□□ -0.6
CSMD1-218ENST00000635120 NUP155O75694 1391 aa11.29□□□□□ -0.6
CSMD1-218ENST00000635120 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
CSMD1-218ENST00000635120 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-218ENST00000635120 H3BQV1 296 aa11.28□□□□□ -0.6
CSMD1-218ENST00000635120 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
CSMD1-218ENST00000635120 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
CSMD1-218ENST00000635120 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
CSMD1-218ENST00000635120 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
CSMD1-218ENST00000635120 GGT6Q6P531 493 aa11.28□□□□□ -0.6
CSMD1-218ENST00000635120 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
CSMD1-218ENST00000635120 WIZO95785 1651 aa11.27□□□□□ -0.61
CSMD1-218ENST00000635120 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-218ENST00000635120 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.61
CSMD1-218ENST00000635120 CEP89Q96ST8 783 aa11.27□□□□□ -0.61
CSMD1-218ENST00000635120 TPD52L1Q16890 204 aaPredicted RBP11.26□□□□□ -0.61
CSMD1-218ENST00000635120 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
CSMD1-218ENST00000635120 CCDC9Q9Y3X0 531 aaKnown RBP11.26□□□□□ -0.61
CSMD1-218ENST00000635120 PHLDB1Q86UU1 1377 aa11.26□□□□□ -0.61
CSMD1-218ENST00000635120 TERF2IPQ9NYB0 399 aa11.25□□□□□ -0.61
CSMD1-218ENST00000635120 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
CSMD1-218ENST00000635120 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
CSMD1-218ENST00000635120 KIF15Q9NS87 1388 aa11.25□□□□□ -0.61
CSMD1-218ENST00000635120 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
CSMD1-218ENST00000635120 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
CSMD1-218ENST00000635120 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
CSMD1-218ENST00000635120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSMD1-218ENST00000635120 GOLGA6L19H0YKK7 550 aa11.24□□□□□ -0.61
CSMD1-218ENST00000635120 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
CSMD1-218ENST00000635120 NLRP13Q86W25 1043 aa11.24□□□□□ -0.61
CSMD1-218ENST00000635120 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
CSMD1-218ENST00000635120 LMOD3Q0VAK6 560 aa11.24□□□□□ -0.61
CSMD1-218ENST00000635120 MARCH6O60337 910 aa11.24□□□□□ -0.61
CSMD1-218ENST00000635120 MCTP1Q6DN14 999 aa11.24□□□□□ -0.61
CSMD1-218ENST00000635120 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
CSMD1-218ENST00000635120 KANK4Q5T7N3 995 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-218ENST00000635120 TRHP20396 242 aaPredicted RBP11.23□□□□□ -0.61
CSMD1-218ENST00000635120 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
CSMD1-218ENST00000635120 LTV1Q96GA3 475 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-218ENST00000635120 TPM1P09493 284 aa11.22□□□□□ -0.61
CSMD1-218ENST00000635120 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
CSMD1-218ENST00000635120 G3V3G9 751 aa11.22□□□□□ -0.61
CSMD1-218ENST00000635120 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
CSMD1-218ENST00000635120 FRAT2O75474 233 aaPredicted RBP11.22□□□□□ -0.61
CSMD1-218ENST00000635120 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
CSMD1-218ENST00000635120 PDE3BQ13370 1112 aa11.21□□□□□ -0.61
CSMD1-218ENST00000635120 CCDC70Q6NSX1 233 aa11.21□□□□□ -0.61
CSMD1-218ENST00000635120 ATP6V1DQ9Y5K8 247 aa11.21□□□□□ -0.61
CSMD1-218ENST00000635120 ZNF771Q7L3S4 317 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-218ENST00000635120 CARMIL2Q6F5E8 1435 aa11.21□□□□□ -0.61
CSMD1-218ENST00000635120 BECN2A8MW95 431 aa11.21□□□□□ -0.61
CSMD1-218ENST00000635120 SLC4A3P48751 1232 aa11.21□□□□□ -0.62
CSMD1-218ENST00000635120 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-218ENST00000635120 NUTM2DQ5VT03 806 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-218ENST00000635120 FAM184AQ8NB25 1140 aa11.2□□□□□ -0.62
CSMD1-218ENST00000635120 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
CSMD1-218ENST00000635120 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
CSMD1-218ENST00000635120 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
CSMD1-218ENST00000635120 AMPHP49418 695 aa11.19□□□□□ -0.62
CSMD1-218ENST00000635120 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
CSMD1-218ENST00000635120 SKOR2Q2VWA4 1001 aaPredicted RBP11.19□□□□□ -0.62
CSMD1-218ENST00000635120 PLIN1O60240 522 aa11.19□□□□□ -0.62
CSMD1-218ENST00000635120 TPM2P07951 284 aa11.19□□□□□ -0.62
CSMD1-218ENST00000635120 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
CSMD1-218ENST00000635120 GSE1Q14687 1217 aa11.18□□□□□ -0.62
CSMD1-218ENST00000635120 GPS2Q13227 327 aa11.18□□□□□ -0.62
CSMD1-218ENST00000635120 DIAPH3Q9NSV4 1193 aa11.18□□□□□ -0.62
CSMD1-218ENST00000635120 FBXO3Q9UK99 471 aa11.18□□□□□ -0.62
CSMD1-218ENST00000635120 MYBBP1AQ9BQG0 1328 aaKnown RBP11.18□□□□□ -0.62
CSMD1-218ENST00000635120 NGDNQ8NEJ9 315 aaKnown RBP11.18□□□□□ -0.62
CSMD1-218ENST00000635120 PDE4AP27815 886 aa11.17□□□□□ -0.62
CSMD1-218ENST00000635120 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-218ENST00000635120 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
CSMD1-218ENST00000635120 TCEAL9Q9UHQ7 104 aa11.17□□□□□ -0.62
CSMD1-218ENST00000635120 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
CSMD1-218ENST00000635120 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
CSMD1-218ENST00000635120 RRP1P56182 461 aaKnown RBP11.15□□□□□ -0.62
CSMD1-218ENST00000635120 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
CSMD1-218ENST00000635120 CECR2Q9BXF3 1484 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 FBXW7Q969H0 707 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 CRBNQ96SW2 442 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 WWC1Q8IX03 1113 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 ZBED9Q6R2W3 1325 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 FAM13BQ9NYF5 915 aa11.15□□□□□ -0.62
CSMD1-218ENST00000635120 REC8O95072 547 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 TEX35Q5T0J7 233 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 CCDC144AA2RUR9 1427 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 IPO7O95373 1038 aaKnown RBP11.14□□□□□ -0.63
CSMD1-218ENST00000635120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
CSMD1-218ENST00000635120 ANO2Q9NQ90 1003 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 HOMER1Q86YM7 354 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
CSMD1-218ENST00000635120 PANK3Q9H999 370 aa11.13□□□□□ -0.63
CSMD1-218ENST00000635120 USP47Q96K76 1375 aa11.13□□□□□ -0.63
CSMD1-218ENST00000635120 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
CSMD1-218ENST00000635120 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms