RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
PCDH15-229ENST00000616114 SENP3Q9H4L4 574 aaPredicted RBP11.33□□□□□ -0.6
PCDH15-229ENST00000616114 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
PCDH15-229ENST00000616114 U2AF1L5P0DN76 240 aaPredicted RBP11.32□□□□□ -0.6
PCDH15-229ENST00000616114 U2AF1Q01081 240 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCDH15-229ENST00000616114 TERF2IPQ9NYB0 399 aa11.32□□□□□ -0.6
PCDH15-229ENST00000616114 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
PCDH15-229ENST00000616114 NAIPQ13075 1403 aa11.32□□□□□ -0.6
PCDH15-229ENST00000616114 CENPQQ7L2Z9 268 aaPredicted RBP11.32□□□□□ -0.6
PCDH15-229ENST00000616114 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
PCDH15-229ENST00000616114 ARXQ96QS3 562 aa11.31□□□□□ -0.6
PCDH15-229ENST00000616114 CENPJQ9HC77 1338 aaPredicted RBP11.31□□□□□ -0.6
PCDH15-229ENST00000616114 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
PCDH15-229ENST00000616114 L1TD1Q5T7N2 865 aaKnown RBP11.31□□□□□ -0.6
PCDH15-229ENST00000616114 DAPK1P53355 1430 aa11.31□□□□□ -0.6
PCDH15-229ENST00000616114 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
PCDH15-229ENST00000616114 E9PSI1 815 aa11.3□□□□□ -0.6
PCDH15-229ENST00000616114 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
PCDH15-229ENST00000616114 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
PCDH15-229ENST00000616114 PTMSP20962 102 aa11.29□□□□□ -0.6
PCDH15-229ENST00000616114 PLEKHH2Q8IVE3 1493 aa11.29□□□□□ -0.6
PCDH15-229ENST00000616114 KIAA0586Q9BVV6 1533 aa11.29□□□□□ -0.6
PCDH15-229ENST00000616114 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
PCDH15-229ENST00000616114 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
PCDH15-229ENST00000616114 STK26Q9P289 416 aa11.27□□□□□ -0.6
PCDH15-229ENST00000616114 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.61
PCDH15-229ENST00000616114 C9orf84Q5VXU9 1444 aa11.27□□□□□ -0.61
PCDH15-229ENST00000616114 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.61
PCDH15-229ENST00000616114 CGNL1Q0VF96 1302 aa11.26□□□□□ -0.61
PCDH15-229ENST00000616114 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-229ENST00000616114 PDE4AP27815 886 aa11.26□□□□□ -0.61
PCDH15-229ENST00000616114 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
PCDH15-229ENST00000616114 EXOC6Q8TAG9 804 aa11.26□□□□□ -0.61
PCDH15-229ENST00000616114 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
PCDH15-229ENST00000616114 LMOD3Q0VAK6 560 aa11.25□□□□□ -0.61
PCDH15-229ENST00000616114 THOC2Q8NI27 1593 aaKnown RBP11.25□□□□□ -0.61
PCDH15-229ENST00000616114 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
PCDH15-229ENST00000616114 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
PCDH15-229ENST00000616114 ARHGAP5Q13017 1502 aa11.24□□□□□ -0.61
PCDH15-229ENST00000616114 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
PCDH15-229ENST00000616114 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
PCDH15-229ENST00000616114 ZBTB7CA1YPR0 619 aa11.24□□□□□ -0.61
PCDH15-229ENST00000616114 AAMPQ13685 434 aa11.24□□□□□ -0.61
PCDH15-229ENST00000616114 MCCP23508 829 aa11.23□□□□□ -0.61
PCDH15-229ENST00000616114 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
PCDH15-229ENST00000616114 PRG4Q92954 1404 aaPredicted RBP11.23□□□□□ -0.61
PCDH15-229ENST00000616114 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
PCDH15-229ENST00000616114 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
PCDH15-229ENST00000616114 CRBNQ96SW2 442 aa11.23□□□□□ -0.61
PCDH15-229ENST00000616114 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
PCDH15-229ENST00000616114 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
PCDH15-229ENST00000616114 GBP4Q96PP9 640 aa11.21□□□□□ -0.62
PCDH15-229ENST00000616114 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.62
PCDH15-229ENST00000616114 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.62
PCDH15-229ENST00000616114 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
PCDH15-229ENST00000616114 SCAPERQ9BY12 1400 aa11.19□□□□□ -0.62
PCDH15-229ENST00000616114 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
PCDH15-229ENST00000616114 APAF1O14727 1248 aa11.18□□□□□ -0.62
PCDH15-229ENST00000616114 PTMAP06454 111 aaKnown RBP11.18□□□□□ -0.62
PCDH15-229ENST00000616114 MLECQ14165 292 aa11.18□□□□□ -0.62
PCDH15-229ENST00000616114 ABCC5O15440 1437 aa11.18□□□□□ -0.62
PCDH15-229ENST00000616114 PLIN1O60240 522 aa11.18□□□□□ -0.62
PCDH15-229ENST00000616114 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
PCDH15-229ENST00000616114 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
PCDH15-229ENST00000616114 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
PCDH15-229ENST00000616114 CAMSAP2Q08AD1 1489 aa11.17□□□□□ -0.62
PCDH15-229ENST00000616114 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
PCDH15-229ENST00000616114 HMMRO75330 724 aa11.17□□□□□ -0.62
PCDH15-229ENST00000616114 MAGI1Q96QZ7 1491 aaPredicted RBP11.15□□□□□ -0.62
PCDH15-229ENST00000616114 MAPKBP1O60336 1514 aa11.15□□□□□ -0.62
PCDH15-229ENST00000616114 CLUAP1Q96AJ1 413 aa11.15□□□□□ -0.62
PCDH15-229ENST00000616114 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
PCDH15-229ENST00000616114 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
PCDH15-229ENST00000616114 HDAC5Q9UQL6 1122 aa11.14□□□□□ -0.63
PCDH15-229ENST00000616114 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
PCDH15-229ENST00000616114 NCOA1Q15788 1441 aa11.14□□□□□ -0.63
PCDH15-229ENST00000616114 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
PCDH15-229ENST00000616114 CFAP43Q8NDM7 1665 aa11.14□□□□□ -0.63
PCDH15-229ENST00000616114 GRIN2AQ12879 1464 aa11.13□□□□□ -0.63
PCDH15-229ENST00000616114 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
PCDH15-229ENST00000616114 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
PCDH15-229ENST00000616114 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
PCDH15-229ENST00000616114 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
PCDH15-229ENST00000616114 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
PCDH15-229ENST00000616114 ZRSR1Q15695 479 aaKnown RBP11.13□□□□□ -0.63
PCDH15-229ENST00000616114 KIF14Q15058 1648 aa11.13□□□□□ -0.63
PCDH15-229ENST00000616114 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
PCDH15-229ENST00000616114 SPRYD3Q8NCJ5 442 aa11.12□□□□□ -0.63
PCDH15-229ENST00000616114 NAP1L5Q96NT1 182 aaPredicted RBP11.12□□□□□ -0.63
PCDH15-229ENST00000616114 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
PCDH15-229ENST00000616114 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
PCDH15-229ENST00000616114 KCNJ4P48050 445 aa11.11□□□□□ -0.63
PCDH15-229ENST00000616114 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
PCDH15-229ENST00000616114 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
PCDH15-229ENST00000616114 EID1Q9Y6B2 187 aa11.11□□□□□ -0.63
PCDH15-229ENST00000616114 RTN4Q9NQC3 1192 aaKnown RBP11.11□□□□□ -0.63
PCDH15-229ENST00000616114 DIAPH1O60610 1272 aaKnown RBP11.11□□□□□ -0.63
PCDH15-229ENST00000616114 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
PCDH15-229ENST00000616114 GOLGA6L3A6NEY3 463 aa11.11□□□□□ -0.63
PCDH15-229ENST00000616114 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms