RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 MLLT3P42568 568 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-207ENST00000608532 DMRTA1Q5VZB9 504 aa11.28□□□□□ -0.6
HDDC2-207ENST00000608532 MAP3K7O43318 606 aa11.27□□□□□ -0.61
HDDC2-207ENST00000608532 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
HDDC2-207ENST00000608532 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
HDDC2-207ENST00000608532 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
HDDC2-207ENST00000608532 C6orf132Q5T0Z8 1188 aa11.24□□□□□ -0.61
HDDC2-207ENST00000608532 OSBPP22059 807 aa11.23□□□□□ -0.61
HDDC2-207ENST00000608532 PRIM1P49642 420 aaKnown RBP11.23□□□□□ -0.61
HDDC2-207ENST00000608532 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
HDDC2-207ENST00000608532 SPNS2Q8IVW8 549 aa11.22□□□□□ -0.61
HDDC2-207ENST00000608532 COL9A1P20849 921 aa11.21□□□□□ -0.61
HDDC2-207ENST00000608532 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
HDDC2-207ENST00000608532 ADGRD1Q6QNK2 874 aa11.2□□□□□ -0.62
HDDC2-207ENST00000608532 TESPA1A2RU30 521 aaPredicted RBP11.18□□□□□ -0.62
HDDC2-207ENST00000608532 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
HDDC2-207ENST00000608532 CDHR5Q9HBB8 845 aa11.17□□□□□ -0.62
HDDC2-207ENST00000608532 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
HDDC2-207ENST00000608532 TK2O00142 265 aa11.16□□□□□ -0.62
HDDC2-207ENST00000608532 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
HDDC2-207ENST00000608532 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
HDDC2-207ENST00000608532 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
HDDC2-207ENST00000608532 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
HDDC2-207ENST00000608532 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
HDDC2-207ENST00000608532 RBM26Q5T8P6 1007 aaKnown RBP11.12□□□□□ -0.63
HDDC2-207ENST00000608532 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
HDDC2-207ENST00000608532 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
HDDC2-207ENST00000608532 HRO43593 1189 aa11.09□□□□□ -0.63
HDDC2-207ENST00000608532 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
HDDC2-207ENST00000608532 KIAA1468Q9P260 1216 aa11.09□□□□□ -0.63
HDDC2-207ENST00000608532 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.64
HDDC2-207ENST00000608532 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
HDDC2-207ENST00000608532 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
HDDC2-207ENST00000608532 PRSS12P56730 875 aa11.07□□□□□ -0.64
HDDC2-207ENST00000608532 MRPL50Q8N5N7 158 aaKnown RBP11.06□□□□□ -0.64
HDDC2-207ENST00000608532 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
HDDC2-207ENST00000608532 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
HDDC2-207ENST00000608532 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
HDDC2-207ENST00000608532 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
HDDC2-207ENST00000608532 NPDC1Q9NQX5 325 aaPredicted RBP11.05□□□□□ -0.64
HDDC2-207ENST00000608532 TSKSQ9UJT2 592 aa11.05□□□□□ -0.64
HDDC2-207ENST00000608532 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
HDDC2-207ENST00000608532 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
HDDC2-207ENST00000608532 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
HDDC2-207ENST00000608532 PTGDRQ13258 359 aa11.03□□□□□ -0.64
HDDC2-207ENST00000608532 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
HDDC2-207ENST00000608532 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.65
HDDC2-207ENST00000608532 FCHSD2O94868 740 aa11.02□□□□□ -0.65
HDDC2-207ENST00000608532 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.65
HDDC2-207ENST00000608532 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
HDDC2-207ENST00000608532 SMAPO00193 183 aa11□□□□□ -0.65
HDDC2-207ENST00000608532 GPIHBP1Q8IV16 184 aa11□□□□□ -0.65
HDDC2-207ENST00000608532 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
HDDC2-207ENST00000608532 NBPF26B4DH59 902 aa10.97□□□□□ -0.65
HDDC2-207ENST00000608532 TATDN2Q93075 761 aa10.97□□□□□ -0.65
HDDC2-207ENST00000608532 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
HDDC2-207ENST00000608532 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
HDDC2-207ENST00000608532 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
HDDC2-207ENST00000608532 WNT2BQ93097 391 aa10.96□□□□□ -0.65
HDDC2-207ENST00000608532 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
HDDC2-207ENST00000608532 HIC1Q14526 733 aa10.94□□□□□ -0.66
HDDC2-207ENST00000608532 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
HDDC2-207ENST00000608532 LMOD2Q6P5Q4 547 aa10.94□□□□□ -0.66
HDDC2-207ENST00000608532 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDDC2-207ENST00000608532 TTC13Q8NBP0 860 aa10.94□□□□□ -0.66
HDDC2-207ENST00000608532 ANKK1Q8NFD2 765 aa10.94□□□□□ -0.66
HDDC2-207ENST00000608532 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
HDDC2-207ENST00000608532 ZFRQ96KR1 1074 aaKnown RBP10.93□□□□□ -0.66
HDDC2-207ENST00000608532 GNPATO15228 680 aa10.92□□□□□ -0.66
HDDC2-207ENST00000608532 GPR37O15354 613 aa10.92□□□□□ -0.66
HDDC2-207ENST00000608532 PTPN5P54829 565 aa10.92□□□□□ -0.66
HDDC2-207ENST00000608532 FECHP22830 423 aa10.91□□□□□ -0.66
HDDC2-207ENST00000608532 BCAMP50895 628 aa10.89□□□□□ -0.67
HDDC2-207ENST00000608532 THSD4Q6ZMP0 1018 aa10.89□□□□□ -0.67
HDDC2-207ENST00000608532 BCANQ96GW7 911 aa10.89□□□□□ -0.67
HDDC2-207ENST00000608532 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
HDDC2-207ENST00000608532 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
HDDC2-207ENST00000608532 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
HDDC2-207ENST00000608532 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
HDDC2-207ENST00000608532 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
HDDC2-207ENST00000608532 SAMD7Q7Z3H4 446 aa10.86□□□□□ -0.67
HDDC2-207ENST00000608532 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
HDDC2-207ENST00000608532 RNF40O75150 1001 aa10.85□□□□□ -0.67
HDDC2-207ENST00000608532 EYA1Q99502 592 aa10.85□□□□□ -0.67
HDDC2-207ENST00000608532 SOWAHBA6NEL2 793 aa10.84□□□□□ -0.67
HDDC2-207ENST00000608532 OATP04181 439 aa10.82□□□□□ -0.68
HDDC2-207ENST00000608532 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
HDDC2-207ENST00000608532 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
HDDC2-207ENST00000608532 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
HDDC2-207ENST00000608532 DNAJB2P25686 324 aa10.8□□□□□ -0.68
HDDC2-207ENST00000608532 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
HDDC2-207ENST00000608532 METTL3Q86U44 580 aaKnown RBP10.79□□□□□ -0.68
HDDC2-207ENST00000608532 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
HDDC2-207ENST00000608532 WBP1LQ9NX94 342 aa10.79□□□□□ -0.68
HDDC2-207ENST00000608532 PPP4CP60510 307 aa10.78□□□□□ -0.68
HDDC2-207ENST00000608532 MAP2K5Q13163 448 aa10.78□□□□□ -0.68
HDDC2-207ENST00000608532 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
HDDC2-207ENST00000608532 TSR3Q9UJK0 312 aaKnown RBP10.78□□□□□ -0.68
HDDC2-207ENST00000608532 SLC4A3P48751 1232 aa10.77□□□□□ -0.69
HDDC2-207ENST00000608532 NLRP7Q8WX94 980 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms