RNA–Protein interactions for RNA: ENST00000608080.1

LINC01440-205, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 3 BASIC

Gene LINC01440, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-205ENST00000608080 PHF14O94880 888 aa12.39□□□□□ -0.43
LINC01440-205ENST00000608080 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
LINC01440-205ENST00000608080 LAPTM4BQ86VI4 370 aa12.38□□□□□ -0.43
LINC01440-205ENST00000608080 PROX2Q3B8N5 592 aa12.36□□□□□ -0.43
LINC01440-205ENST00000608080 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
LINC01440-205ENST00000608080 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
LINC01440-205ENST00000608080 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
LINC01440-205ENST00000608080 COL9A1P20849 921 aa12.34□□□□□ -0.43
LINC01440-205ENST00000608080 EPAS1Q99814 870 aa12.33□□□□□ -0.44
LINC01440-205ENST00000608080 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
LINC01440-205ENST00000608080 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
LINC01440-205ENST00000608080 BCAMP50895 628 aa12.3□□□□□ -0.44
LINC01440-205ENST00000608080 ZFRQ96KR1 1074 aaKnown RBP12.28□□□□□ -0.44
LINC01440-205ENST00000608080 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
LINC01440-205ENST00000608080 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
LINC01440-205ENST00000608080 CADPS2Q86UW7 1296 aa12.26□□□□□ -0.45
LINC01440-205ENST00000608080 C6orf132Q5T0Z8 1188 aa12.25□□□□□ -0.45
LINC01440-205ENST00000608080 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
LINC01440-205ENST00000608080 DPYSL4O14531 572 aa12.23□□□□□ -0.45
LINC01440-205ENST00000608080 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
LINC01440-205ENST00000608080 KCNC4Q03721 635 aa12.22□□□□□ -0.45
LINC01440-205ENST00000608080 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
LINC01440-205ENST00000608080 WBP1LQ9NX94 342 aa12.21□□□□□ -0.45
LINC01440-205ENST00000608080 LRCH3Q96II8 777 aa12.2□□□□□ -0.46
LINC01440-205ENST00000608080 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
LINC01440-205ENST00000608080 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
LINC01440-205ENST00000608080 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
LINC01440-205ENST00000608080 DDX12PQ92771 950 aa12.16□□□□□ -0.46
LINC01440-205ENST00000608080 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
LINC01440-205ENST00000608080 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
LINC01440-205ENST00000608080 NBR1Q14596 966 aa12.14□□□□□ -0.47
LINC01440-205ENST00000608080 PACS2Q86VP3 889 aa12.13□□□□□ -0.47
LINC01440-205ENST00000608080 MAP3K7O43318 606 aa12.12□□□□□ -0.47
LINC01440-205ENST00000608080 PDIA6Q15084 440 aa12.12□□□□□ -0.47
LINC01440-205ENST00000608080 Q6ZNB5 142 aa12.12□□□□□ -0.47
LINC01440-205ENST00000608080 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
LINC01440-205ENST00000608080 LAPTM4AQ15012 233 aa12.09□□□□□ -0.47
LINC01440-205ENST00000608080 TSKSQ9UJT2 592 aa12.08□□□□□ -0.48
LINC01440-205ENST00000608080 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
LINC01440-205ENST00000608080 PPP4CP60510 307 aa12.06□□□□□ -0.48
LINC01440-205ENST00000608080 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
LINC01440-205ENST00000608080 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
LINC01440-205ENST00000608080 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
LINC01440-205ENST00000608080 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
LINC01440-205ENST00000608080 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.49
LINC01440-205ENST00000608080 PRSS12P56730 875 aa12□□□□□ -0.49
LINC01440-205ENST00000608080 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
LINC01440-205ENST00000608080 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
LINC01440-205ENST00000608080 E2F4Q16254 413 aa11.96□□□□□ -0.49
LINC01440-205ENST00000608080 TJAP1Q5JTD0 557 aa11.96□□□□□ -0.49
LINC01440-205ENST00000608080 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
LINC01440-205ENST00000608080 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
LINC01440-205ENST00000608080 PNMA3Q9UL41 463 aa11.96□□□□□ -0.49
LINC01440-205ENST00000608080 SMAPO00193 183 aa11.95□□□□□ -0.5
LINC01440-205ENST00000608080 HDGFP51858 240 aaKnown RBP11.95□□□□□ -0.5
LINC01440-205ENST00000608080 ARIH1Q9Y4X5 557 aaPredicted RBP11.95□□□□□ -0.5
LINC01440-205ENST00000608080 TATDN2Q93075 761 aa11.94□□□□□ -0.5
LINC01440-205ENST00000608080 MTRQ99707 1265 aa11.94□□□□□ -0.5
LINC01440-205ENST00000608080 GFRA3O60609 400 aa11.93□□□□□ -0.5
LINC01440-205ENST00000608080 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
LINC01440-205ENST00000608080 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
LINC01440-205ENST00000608080 RNF40O75150 1001 aa11.92□□□□□ -0.5
LINC01440-205ENST00000608080 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
LINC01440-205ENST00000608080 FAM198AQ9UFP1 575 aa11.92□□□□□ -0.5
LINC01440-205ENST00000608080 WDR70Q9NW82 654 aa11.91□□□□□ -0.5
LINC01440-205ENST00000608080 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
LINC01440-205ENST00000608080 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
LINC01440-205ENST00000608080 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
LINC01440-205ENST00000608080 NRG2O14511 850 aaPredicted RBP11.89□□□□□ -0.51
LINC01440-205ENST00000608080 PPP1R18Q6NYC8 613 aa11.88□□□□□ -0.51
LINC01440-205ENST00000608080 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
LINC01440-205ENST00000608080 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
LINC01440-205ENST00000608080 NUDT18Q6ZVK8 323 aa11.87□□□□□ -0.51
LINC01440-205ENST00000608080 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
LINC01440-205ENST00000608080 C3orf80F5H4A9 247 aa11.85□□□□□ -0.51
LINC01440-205ENST00000608080 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
LINC01440-205ENST00000608080 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
LINC01440-205ENST00000608080 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
LINC01440-205ENST00000608080 OSBPP22059 807 aa11.84□□□□□ -0.51
LINC01440-205ENST00000608080 GGCXP38435 758 aa11.84□□□□□ -0.51
LINC01440-205ENST00000608080 APLP1P51693 650 aa11.83□□□□□ -0.52
LINC01440-205ENST00000608080 LCE2BO14633 110 aa11.8□□□□□ -0.52
LINC01440-205ENST00000608080 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
LINC01440-205ENST00000608080 PRR14Q9BWN1 585 aa11.8□□□□□ -0.52
LINC01440-205ENST00000608080 SWT1Q5T5J6 900 aaKnown RBP11.79□□□□□ -0.52
LINC01440-205ENST00000608080 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
LINC01440-205ENST00000608080 TTC13Q8NBP0 860 aa11.78□□□□□ -0.52
LINC01440-205ENST00000608080 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
LINC01440-205ENST00000608080 TMUB1Q9BVT8 246 aa11.76□□□□□ -0.53
LINC01440-205ENST00000608080 COPS2P61201 443 aa11.75□□□□□ -0.53
LINC01440-205ENST00000608080 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
LINC01440-205ENST00000608080 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
LINC01440-205ENST00000608080 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
LINC01440-205ENST00000608080 ZPR1O75312 459 aa11.72□□□□□ -0.53
LINC01440-205ENST00000608080 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
LINC01440-205ENST00000608080 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
LINC01440-205ENST00000608080 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
LINC01440-205ENST00000608080 EYA1Q99502 592 aa11.68□□□□□ -0.54
LINC01440-205ENST00000608080 DNAJB2P25686 324 aa11.66□□□□□ -0.54
LINC01440-205ENST00000608080 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms