RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 MAP3K7O43318 606 aa7.74□□□□□ -1.17
AC004542.1-201ENST00000602955 SLC39A7Q92504 469 aa7.73□□□□□ -1.17
AC004542.1-201ENST00000602955 APBB1O00213 710 aa7.72□□□□□ -1.17
AC004542.1-201ENST00000602955 MDM2Q00987 491 aaPredicted RBP7.72□□□□□ -1.17
AC004542.1-201ENST00000602955 C3orf67Q6ZVT6 689 aa7.72□□□□□ -1.17
AC004542.1-201ENST00000602955 SLAIN1Q8ND83 568 aa7.72□□□□□ -1.17
AC004542.1-201ENST00000602955 PHOX2BQ99453 314 aa7.72□□□□□ -1.17
AC004542.1-201ENST00000602955 PCDHGA10Q9Y5H3 936 aa7.72□□□□□ -1.17
AC004542.1-201ENST00000602955 POTEFA5A3E0 1075 aa7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 C7P10643 843 aa7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 MCM6Q14566 821 aa7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 SKIV2LQ15477 1246 aaKnown RBP7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 TYW1BQ6NUM6 668 aa7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 FBXW7Q969H0 707 aa7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 ARID3AQ99856 593 aa7.71□□□□□ -1.18
AC004542.1-201ENST00000602955 ARID3CA6NKF2 412 aa7.7□□□□□ -1.18
AC004542.1-201ENST00000602955 TRAK2O60296 914 aa7.7□□□□□ -1.18
AC004542.1-201ENST00000602955 GABBR2O75899 941 aa7.7□□□□□ -1.18
AC004542.1-201ENST00000602955 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
AC004542.1-201ENST00000602955 TSR1Q2NL82 804 aaKnown RBP7.7□□□□□ -1.18
AC004542.1-201ENST00000602955 RBM33Q96EV2 1170 aaKnown RBP7.7□□□□□ -1.18
AC004542.1-201ENST00000602955 OATP04181 439 aa7.69□□□□□ -1.18
AC004542.1-201ENST00000602955 DCBLD2Q96PD2 775 aa7.69□□□□□ -1.18
AC004542.1-201ENST00000602955 PODXL2Q9NZ53 605 aa7.69□□□□□ -1.18
AC004542.1-201ENST00000602955 KDM4FA0A1W2PPD8 638 aa7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 METTL3Q86U44 580 aaKnown RBP7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 CERKQ8TCT0 537 aa7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 JPH4Q96JJ6 628 aa7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 BEGAINQ9BUH8 593 aa7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 FAM217BQ9NTX9 383 aaPredicted RBP7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 PCDHGA4Q9Y5G9 962 aa7.68□□□□□ -1.18
AC004542.1-201ENST00000602955 CLUAP1Q96AJ1 413 aa7.67□□□□□ -1.18
AC004542.1-201ENST00000602955 ADGRG1Q9Y653 693 aa7.66□□□□□ -1.18
AC004542.1-201ENST00000602955 FOSBP53539 338 aa7.65□□□□□ -1.18
AC004542.1-201ENST00000602955 TTC13Q8NBP0 860 aa7.65□□□□□ -1.18
AC004542.1-201ENST00000602955 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
AC004542.1-201ENST00000602955 PXYLP1Q8TE99 480 aa7.65□□□□□ -1.18
AC004542.1-201ENST00000602955 RBM27Q9P2N5 1060 aaKnown RBP7.65□□□□□ -1.18
AC004542.1-201ENST00000602955 METRNQ9UJH8 293 aa7.65□□□□□ -1.18
AC004542.1-201ENST00000602955 PADI6Q6TGC4 694 aa7.64□□□□□ -1.19
AC004542.1-201ENST00000602955 TRIM26Q12899 539 aaPredicted RBP7.63□□□□□ -1.19
AC004542.1-201ENST00000602955 FAM161AQ3B820 660 aa7.63□□□□□ -1.19
AC004542.1-201ENST00000602955 C6orf132Q5T0Z8 1188 aa7.63□□□□□ -1.19
AC004542.1-201ENST00000602955 MYSM1Q5VVJ2 828 aa7.63□□□□□ -1.19
AC004542.1-201ENST00000602955 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.63□□□□□ -1.19
AC004542.1-201ENST00000602955 PROSER2Q86WR7 435 aaPredicted RBP7.62□□□□□ -1.19
AC004542.1-201ENST00000602955 CCDC82Q8N4S0 544 aa7.62□□□□□ -1.19
AC004542.1-201ENST00000602955 POLR3EQ9NVU0 708 aa7.62□□□□□ -1.19
AC004542.1-201ENST00000602955 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.62□□□□□ -1.19
AC004542.1-201ENST00000602955 FNBP4Q8N3X1 1017 aaPredicted RBP7.61□□□□□ -1.19
AC004542.1-201ENST00000602955 NLRP7Q8WX94 980 aa7.61□□□□□ -1.19
AC004542.1-201ENST00000602955 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 RAD21O60216 631 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 HRCP23327 699 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 DIXDC1Q155Q3 683 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 BANK1Q8NDB2 785 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
AC004542.1-201ENST00000602955 PRSS12P56730 875 aa7.59□□□□□ -1.19
AC004542.1-201ENST00000602955 RBM46Q8TBY0 533 aaKnown RBP7.59□□□□□ -1.19
AC004542.1-201ENST00000602955 POM121Q96HA1 1249 aa7.59□□□□□ -1.19
AC004542.1-201ENST00000602955 ZNF454Q8N9F8 522 aa7.58□□□□□ -1.2
AC004542.1-201ENST00000602955 ATP1B4Q9UN42 357 aaPredicted RBP7.58□□□□□ -1.2
AC004542.1-201ENST00000602955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 PDIA4P13667 645 aaKnown RBP7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 RFC5P40937 340 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 PPP2R2DQ66LE6 453 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 CDCA7LQ96GN5 454 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 ADAM33Q9BZ11 813 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 ZNF777Q9ULD5 760 aaPredicted RBP7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
AC004542.1-201ENST00000602955 TUSC1Q2TAM9 212 aa7.55□□□□□ -1.2
AC004542.1-201ENST00000602955 SERPINA10Q9UK55 444 aa7.55□□□□□ -1.2
AC004542.1-201ENST00000602955 SNRKQ9NRH2 765 aa7.54□□□□□ -1.2
AC004542.1-201ENST00000602955 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
AC004542.1-201ENST00000602955 SPTLC1O15269 473 aa7.53□□□□□ -1.2
AC004542.1-201ENST00000602955 SPIRE2Q8WWL2 714 aa7.53□□□□□ -1.2
AC004542.1-201ENST00000602955 CCDC97Q96F63 343 aaPredicted RBP7.53□□□□□ -1.2
AC004542.1-201ENST00000602955 EYA1Q99502 592 aa7.53□□□□□ -1.2
AC004542.1-201ENST00000602955 LIMD1Q9UGP4 676 aa7.53□□□□□ -1.2
AC004542.1-201ENST00000602955 SOCS7O14512 581 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 NUDT7P0C024 238 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 CD46P15529 392 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 DOK7Q18PE1 504 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 FBXO31Q5XUX0 539 aaPredicted RBP7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 RIC3Q7Z5B4 369 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 ZSWIM6Q9HCJ5 1215 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 FAM198AQ9UFP1 575 aa7.52□□□□□ -1.21
AC004542.1-201ENST00000602955 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
AC004542.1-201ENST00000602955 PLSCR2Q9NRY7 297 aa7.51□□□□□ -1.21
AC004542.1-201ENST00000602955 GJA5P36382 358 aa7.5□□□□□ -1.21
AC004542.1-201ENST00000602955 ARSIQ5FYB1 569 aa7.5□□□□□ -1.21
AC004542.1-201ENST00000602955 RSBN1LQ6PCB5 846 aaPredicted RBP7.5□□□□□ -1.21
AC004542.1-201ENST00000602955 SULF1Q8IWU6 871 aa7.5□□□□□ -1.21
AC004542.1-201ENST00000602955 MTMR14Q8NCE2 650 aa7.5□□□□□ -1.21
AC004542.1-201ENST00000602955 ZBTB7CA1YPR0 619 aa7.49□□□□□ -1.21
AC004542.1-201ENST00000602955 COL9A1P20849 921 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms