RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 H0YHG0 523 aa15.01□□□□□ -0.01
SHANK2-218ENST00000601538 NGEFQ8N5V2 710 aa15□□□□□ -0.01
SHANK2-218ENST00000601538 SF3A1Q15459 793 aaKnown RBP15□□□□□ -0.01
SHANK2-218ENST00000601538 RRP7BPQ9NSQ0 103 aa15□□□□□ -0.01
SHANK2-218ENST00000601538 RTF1Q92541 710 aaKnown RBP15□□□□□ -0.01
SHANK2-218ENST00000601538 MYO6Q9UM54 1294 aa15□□□□□ -0.01
SHANK2-218ENST00000601538 PDCL2Q8N4E4 241 aa15□□□□□ -0.01
SHANK2-218ENST00000601538 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
SHANK2-218ENST00000601538 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
SHANK2-218ENST00000601538 ITPRIPQ8IWB1 547 aa14.98□□□□□ -0.01
SHANK2-218ENST00000601538 USP8P40818 1118 aa14.98□□□□□ -0.01
SHANK2-218ENST00000601538 CC2D1BQ5T0F9 858 aaKnown RBP14.98□□□□□ -0.01
SHANK2-218ENST00000601538 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
SHANK2-218ENST00000601538 H3BQV1 296 aa14.96□□□□□ -0.01
SHANK2-218ENST00000601538 IFFO2Q5TF58 517 aa14.96□□□□□ -0.01
SHANK2-218ENST00000601538 HOMER1Q86YM7 354 aa14.96□□□□□ -0.01
SHANK2-218ENST00000601538 CCDC39Q9UFE4 941 aa14.96□□□□□ -0.01
SHANK2-218ENST00000601538 POGKQ9P215 609 aa14.96□□□□□ -0.01
SHANK2-218ENST00000601538 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
SHANK2-218ENST00000601538 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
SHANK2-218ENST00000601538 PDE4CQ08493 712 aa14.95□□□□□ -0.02
SHANK2-218ENST00000601538 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
SHANK2-218ENST00000601538 TRIM6-TRIM34B2RNG4 842 aa14.95□□□□□ -0.02
SHANK2-218ENST00000601538 ZRSR2Q15696 482 aaKnown RBP14.95□□□□□ -0.02
SHANK2-218ENST00000601538 CCDC173Q0VFZ6 552 aa14.94□□□□□ -0.02
SHANK2-218ENST00000601538 NEXNQ0ZGT2 675 aa14.94□□□□□ -0.02
SHANK2-218ENST00000601538 LEKR1Q6ZMV7 388 aa14.94□□□□□ -0.02
SHANK2-218ENST00000601538 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
SHANK2-218ENST00000601538 CREBRFQ8IUR6 639 aa14.94□□□□□ -0.02
SHANK2-218ENST00000601538 ZNF592Q92610 1267 aa14.94□□□□□ -0.02
SHANK2-218ENST00000601538 CCP110O43303 1012 aa14.93□□□□□ -0.02
SHANK2-218ENST00000601538 GOLGA6L7A0A1B0GV03 622 aa14.93□□□□□ -0.02
SHANK2-218ENST00000601538 PDE4AP27815 886 aa14.93□□□□□ -0.02
SHANK2-218ENST00000601538 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
SHANK2-218ENST00000601538 TAF7LQ5H9L4 462 aa14.92□□□□□ -0.02
SHANK2-218ENST00000601538 MNS1Q8NEH6 495 aa14.92□□□□□ -0.02
SHANK2-218ENST00000601538 KANK1Q14678 1352 aa14.92□□□□□ -0.02
SHANK2-218ENST00000601538 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
SHANK2-218ENST00000601538 NACADO15069 1562 aa14.91□□□□□ -0.02
SHANK2-218ENST00000601538 LRRFIP1Q32MZ4 808 aaKnown RBP14.91□□□□□ -0.02
SHANK2-218ENST00000601538 NAT10Q9H0A0 1025 aaKnown RBP14.91□□□□□ -0.02
SHANK2-218ENST00000601538 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
SHANK2-218ENST00000601538 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHANK2-218ENST00000601538 CCDC47Q96A33 483 aaKnown RBP14.9□□□□□ -0.02
SHANK2-218ENST00000601538 C11orf95C9JLR9 678 aaPredicted RBP14.9□□□□□ -0.02
SHANK2-218ENST00000601538 NINLQ9Y2I6 1382 aa14.89□□□□□ -0.03
SHANK2-218ENST00000601538 REC8O95072 547 aa14.88□□□□□ -0.03
SHANK2-218ENST00000601538 GORABQ5T7V8 394 aa14.88□□□□□ -0.03
SHANK2-218ENST00000601538 FAM184AQ8NB25 1140 aa14.88□□□□□ -0.03
SHANK2-218ENST00000601538 STK31Q9BXU1 1019 aa14.88□□□□□ -0.03
SHANK2-218ENST00000601538 ANKRD30AQ9BXX3 1397 aa14.88□□□□□ -0.03
SHANK2-218ENST00000601538 NEFHP12036 1026 aa14.87□□□□□ -0.03
SHANK2-218ENST00000601538 CGNL1Q0VF96 1302 aa14.87□□□□□ -0.03
SHANK2-218ENST00000601538 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
SHANK2-218ENST00000601538 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
SHANK2-218ENST00000601538 MCM5P33992 734 aa14.87□□□□□ -0.03
SHANK2-218ENST00000601538 DEF6Q9H4E7 631 aa14.86□□□□□ -0.03
SHANK2-218ENST00000601538 NFKBIBQ15653 356 aa14.86□□□□□ -0.03
SHANK2-218ENST00000601538 NASPP49321 788 aaPredicted RBP14.86□□□□□ -0.03
SHANK2-218ENST00000601538 LMOD3Q0VAK6 560 aa14.86□□□□□ -0.03
SHANK2-218ENST00000601538 DYDC1Q8WWB3 177 aa14.86□□□□□ -0.03
SHANK2-218ENST00000601538 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
SHANK2-218ENST00000601538 CHMP5Q9NZZ3 219 aa14.85□□□□□ -0.03
SHANK2-218ENST00000601538 LETM1O95202 739 aaPredicted RBP14.85□□□□□ -0.03
SHANK2-218ENST00000601538 NUCB2P80303 420 aa14.85□□□□□ -0.03
SHANK2-218ENST00000601538 IFT57Q9NWB7 429 aa14.85□□□□□ -0.03
SHANK2-218ENST00000601538 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
SHANK2-218ENST00000601538 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
SHANK2-218ENST00000601538 KIAA0754O94854 1291 aa14.85□□□□□ -0.03
SHANK2-218ENST00000601538 CPLX2Q6PUV4 134 aaKnown RBP14.85□□□□□ -0.03
SHANK2-218ENST00000601538 CFDP1Q9UEE9 299 aaPredicted RBP14.85□□□□□ -0.03
SHANK2-218ENST00000601538 AKAP17AQ02040 695 aaKnown RBP14.84□□□□□ -0.03
SHANK2-218ENST00000601538 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
SHANK2-218ENST00000601538 CALCOCO1Q9P1Z2 691 aa14.84□□□□□ -0.03
SHANK2-218ENST00000601538 CENPJQ9HC77 1338 aaPredicted RBP14.84□□□□□ -0.03
SHANK2-218ENST00000601538 AXDND1Q5T1B0 1012 aaPredicted RBP14.84□□□□□ -0.03
SHANK2-218ENST00000601538 SMC4Q9NTJ3 1288 aa14.84□□□□□ -0.03
SHANK2-218ENST00000601538 APBB1O00213 710 aa14.83□□□□□ -0.04
SHANK2-218ENST00000601538 KIF21BO75037 1637 aa14.83□□□□□ -0.04
SHANK2-218ENST00000601538 MARCH6O60337 910 aa14.83□□□□□ -0.04
SHANK2-218ENST00000601538 SASS6Q6UVJ0 657 aa14.82□□□□□ -0.04
SHANK2-218ENST00000601538 FAM107BQ9H098 131 aa14.82□□□□□ -0.04
SHANK2-218ENST00000601538 PLEKHH2Q8IVE3 1493 aa14.82□□□□□ -0.04
SHANK2-218ENST00000601538 RNF20Q5VTR2 975 aa14.81□□□□□ -0.04
SHANK2-218ENST00000601538 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
SHANK2-218ENST00000601538 RUFY2Q8WXA3 655 aa14.81□□□□□ -0.04
SHANK2-218ENST00000601538 PCMTD1Q96MG8 357 aaPredicted RBP14.81□□□□□ -0.04
SHANK2-218ENST00000601538 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
SHANK2-218ENST00000601538 SENP3-EIF4A1A0A087X0R7 540 aa14.8□□□□□ -0.04
SHANK2-218ENST00000601538 TRIM29Q14134 588 aa14.8□□□□□ -0.04
SHANK2-218ENST00000601538 MBD3O95983 291 aa14.8□□□□□ -0.04
SHANK2-218ENST00000601538 FMN1Q68DA7 1419 aa14.8□□□□□ -0.04
SHANK2-218ENST00000601538 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
SHANK2-218ENST00000601538 DYNC1I1O14576 645 aa14.79□□□□□ -0.04
SHANK2-218ENST00000601538 HDGFL2Q7Z4V5 671 aaPredicted RBP14.79□□□□□ -0.04
SHANK2-218ENST00000601538 ESPNB1AK53 854 aa14.79□□□□□ -0.04
SHANK2-218ENST00000601538 HSP90AB3PQ58FF7 597 aa14.79□□□□□ -0.04
SHANK2-218ENST00000601538 ROCK1Q13464 1354 aa14.79□□□□□ -0.04
SHANK2-218ENST00000601538 EIF3JO75822 258 aaKnown RBP14.78□□□□□ -0.04
SHANK2-218ENST00000601538 ZMYND15Q9H091 742 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms