RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
NEDD4L-230ENST00000590638 JPH4Q96JJ6 628 aa13.71□□□□□ -0.21
NEDD4L-230ENST00000590638 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
NEDD4L-230ENST00000590638 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
NEDD4L-230ENST00000590638 NUDT7P0C024 238 aa13.69□□□□□ -0.22
NEDD4L-230ENST00000590638 ARSIQ5FYB1 569 aa13.69□□□□□ -0.22
NEDD4L-230ENST00000590638 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
NEDD4L-230ENST00000590638 ZNF454Q8N9F8 522 aa13.68□□□□□ -0.22
NEDD4L-230ENST00000590638 CDHR5Q9HBB8 845 aa13.68□□□□□ -0.22
NEDD4L-230ENST00000590638 FECHP22830 423 aa13.67□□□□□ -0.22
NEDD4L-230ENST00000590638 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
NEDD4L-230ENST00000590638 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
NEDD4L-230ENST00000590638 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
NEDD4L-230ENST00000590638 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
NEDD4L-230ENST00000590638 FOSBP53539 338 aa13.64□□□□□ -0.23
NEDD4L-230ENST00000590638 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
NEDD4L-230ENST00000590638 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
NEDD4L-230ENST00000590638 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
NEDD4L-230ENST00000590638 SNPHO15079 494 aa13.63□□□□□ -0.23
NEDD4L-230ENST00000590638 LHX8Q68G74 356 aa13.63□□□□□ -0.23
NEDD4L-230ENST00000590638 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
NEDD4L-230ENST00000590638 IL27Q8NEV9 243 aa13.61□□□□□ -0.23
NEDD4L-230ENST00000590638 AMHR2Q16671 573 aa13.6□□□□□ -0.23
NEDD4L-230ENST00000590638 CERKQ8TCT0 537 aa13.6□□□□□ -0.23
NEDD4L-230ENST00000590638 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
NEDD4L-230ENST00000590638 NPDC1Q9NQX5 325 aaPredicted RBP13.59□□□□□ -0.23
NEDD4L-230ENST00000590638 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
NEDD4L-230ENST00000590638 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
NEDD4L-230ENST00000590638 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
NEDD4L-230ENST00000590638 PPP4R3BQ5MIZ7 849 aa13.56□□□□□ -0.24
NEDD4L-230ENST00000590638 LHX6Q9UPM6 363 aa13.55□□□□□ -0.24
NEDD4L-230ENST00000590638 PARP9Q8IXQ6 854 aa13.54□□□□□ -0.24
NEDD4L-230ENST00000590638 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
NEDD4L-230ENST00000590638 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
NEDD4L-230ENST00000590638 PADI6Q6TGC4 694 aa13.51□□□□□ -0.25
NEDD4L-230ENST00000590638 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
NEDD4L-230ENST00000590638 OATP04181 439 aa13.49□□□□□ -0.25
NEDD4L-230ENST00000590638 FAM117AQ9C073 453 aa13.49□□□□□ -0.25
NEDD4L-230ENST00000590638 CLCN1P35523 988 aa13.48□□□□□ -0.25
NEDD4L-230ENST00000590638 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
NEDD4L-230ENST00000590638 RBM27Q9P2N5 1060 aaKnown RBP13.47□□□□□ -0.25
NEDD4L-230ENST00000590638 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
NEDD4L-230ENST00000590638 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.25
NEDD4L-230ENST00000590638 PRSS12P56730 875 aa13.46□□□□□ -0.25
NEDD4L-230ENST00000590638 GIGYF2Q6Y7W6 1299 aaKnown RBP13.46□□□□□ -0.25
NEDD4L-230ENST00000590638 PTPREP23469 700 aa13.45□□□□□ -0.26
NEDD4L-230ENST00000590638 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
NEDD4L-230ENST00000590638 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
NEDD4L-230ENST00000590638 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
NEDD4L-230ENST00000590638 BAZ1AQ9NRL2 1556 aaPredicted RBP13.45□□□□□ -0.26
NEDD4L-230ENST00000590638 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
NEDD4L-230ENST00000590638 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
NEDD4L-230ENST00000590638 BCL2L12Q9HB09 334 aa13.44□□□□□ -0.26
NEDD4L-230ENST00000590638 GPCPD1Q9NPB8 672 aa13.44□□□□□ -0.26
NEDD4L-230ENST00000590638 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
NEDD4L-230ENST00000590638 METTL3Q86U44 580 aaKnown RBP13.42□□□□□ -0.26
NEDD4L-230ENST00000590638 RBM46Q8TBY0 533 aaKnown RBP13.42□□□□□ -0.26
NEDD4L-230ENST00000590638 ADGRG1Q9Y653 693 aa13.42□□□□□ -0.26
NEDD4L-230ENST00000590638 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
NEDD4L-230ENST00000590638 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
NEDD4L-230ENST00000590638 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
NEDD4L-230ENST00000590638 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
NEDD4L-230ENST00000590638 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
NEDD4L-230ENST00000590638 COL9A1P20849 921 aa13.38□□□□□ -0.27
NEDD4L-230ENST00000590638 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
NEDD4L-230ENST00000590638 MS4A1P11836 297 aa13.37□□□□□ -0.27
NEDD4L-230ENST00000590638 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
NEDD4L-230ENST00000590638 REPIN1Q9BWE0 567 aaKnown RBP13.37□□□□□ -0.27
NEDD4L-230ENST00000590638 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
NEDD4L-230ENST00000590638 SSTR3P32745 418 aaPredicted RBP13.35□□□□□ -0.27
NEDD4L-230ENST00000590638 NLRP7Q8WX94 980 aa13.35□□□□□ -0.27
NEDD4L-230ENST00000590638 KCNK17Q96T54 332 aa13.35□□□□□ -0.27
NEDD4L-230ENST00000590638 PACS2Q86VP3 889 aa13.34□□□□□ -0.27
NEDD4L-230ENST00000590638 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
NEDD4L-230ENST00000590638 TMUB1Q9BVT8 246 aa13.32□□□□□ -0.28
NEDD4L-230ENST00000590638 ATP1B4Q9UN42 357 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-230ENST00000590638 ERBB3P21860 1342 aa13.32□□□□□ -0.28
NEDD4L-230ENST00000590638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-230ENST00000590638 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 NUDT18Q6ZVK8 323 aa13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 WIZO95785 1651 aa13.3□□□□□ -0.28
NEDD4L-230ENST00000590638 BEGAINQ9BUH8 593 aa13.29□□□□□ -0.28
NEDD4L-230ENST00000590638 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
NEDD4L-230ENST00000590638 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
NEDD4L-230ENST00000590638 RCCD1A6NED2 376 aa13.27□□□□□ -0.29
NEDD4L-230ENST00000590638 TATDN2Q93075 761 aa13.27□□□□□ -0.29
NEDD4L-230ENST00000590638 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
NEDD4L-230ENST00000590638 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
NEDD4L-230ENST00000590638 EMP3P54852 163 aa13.25□□□□□ -0.29
NEDD4L-230ENST00000590638 EYA1Q99502 592 aa13.25□□□□□ -0.29
NEDD4L-230ENST00000590638 DNAJB2P25686 324 aa13.24□□□□□ -0.29
NEDD4L-230ENST00000590638 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
NEDD4L-230ENST00000590638 EIF4G1Q04637 1599 aaKnown RBP13.24□□□□□ -0.29
NEDD4L-230ENST00000590638 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
NEDD4L-230ENST00000590638 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
NEDD4L-230ENST00000590638 SULF1Q8IWU6 871 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms