RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ADGBQ8N7X0 1667 aa19.57■□□□□ 0.72
NEDD4L-223ENST00000588516 NEFLP07196 543 aa19.56■□□□□ 0.72
NEDD4L-223ENST00000588516 ESF1Q9H501 851 aaKnown RBP19.55■□□□□ 0.72
NEDD4L-223ENST00000588516 ABCC5O15440 1437 aa19.55■□□□□ 0.72
NEDD4L-223ENST00000588516 RPRD2Q5VT52 1461 aaKnown RBP19.52■□□□□ 0.72
NEDD4L-223ENST00000588516 PLCH2O75038 1416 aa19.52■□□□□ 0.72
NEDD4L-223ENST00000588516 EFCAB2Q5VUJ9 269 aa19.51■□□□□ 0.71
NEDD4L-223ENST00000588516 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
NEDD4L-223ENST00000588516 ANKRD30BQ9BXX2 1392 aa19.51■□□□□ 0.71
NEDD4L-223ENST00000588516 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
NEDD4L-223ENST00000588516 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
NEDD4L-223ENST00000588516 NCOA1Q15788 1441 aa19.48■□□□□ 0.71
NEDD4L-223ENST00000588516 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
NEDD4L-223ENST00000588516 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
NEDD4L-223ENST00000588516 HSPA5P11021 654 aaKnown RBP19.47■□□□□ 0.71
NEDD4L-223ENST00000588516 AFAP1Q8N556 730 aa19.47■□□□□ 0.71
NEDD4L-223ENST00000588516 CROCC2H7BZ55 1655 aa19.46■□□□□ 0.71
NEDD4L-223ENST00000588516 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
NEDD4L-223ENST00000588516 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
NEDD4L-223ENST00000588516 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
NEDD4L-223ENST00000588516 C3P01024 1663 aa19.44■□□□□ 0.7
NEDD4L-223ENST00000588516 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
NEDD4L-223ENST00000588516 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
NEDD4L-223ENST00000588516 ZNF518AQ6AHZ1 1483 aa19.43■□□□□ 0.7
NEDD4L-223ENST00000588516 HIRIP3Q9BW71 556 aaPredicted RBP19.43■□□□□ 0.7
NEDD4L-223ENST00000588516 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
NEDD4L-223ENST00000588516 KIF14Q15058 1648 aa19.43■□□□□ 0.7
NEDD4L-223ENST00000588516 POLR1AO95602 1720 aaPredicted RBP19.42■□□□□ 0.7
NEDD4L-223ENST00000588516 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
NEDD4L-223ENST00000588516 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
NEDD4L-223ENST00000588516 KIAA1107Q9UPP5 1409 aa19.39■□□□□ 0.69
NEDD4L-223ENST00000588516 HSPA1LP34931 641 aa19.38■□□□□ 0.69
NEDD4L-223ENST00000588516 WASHC2AQ641Q2 1341 aa19.37■□□□□ 0.69
NEDD4L-223ENST00000588516 RSPH4AQ5TD94 716 aa19.37■□□□□ 0.69
NEDD4L-223ENST00000588516 DIP2CQ9Y2E4 1556 aa19.37■□□□□ 0.69
NEDD4L-223ENST00000588516 CCDC7Q96M83 1385 aa19.36■□□□□ 0.69
NEDD4L-223ENST00000588516 PIP4K2BP78356 416 aa19.36■□□□□ 0.69
NEDD4L-223ENST00000588516 ERICH6BQ5W0A0 696 aa19.36■□□□□ 0.69
NEDD4L-223ENST00000588516 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
NEDD4L-223ENST00000588516 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
NEDD4L-223ENST00000588516 PZPP20742 1482 aa19.36■□□□□ 0.69
NEDD4L-223ENST00000588516 ARHGAP5Q13017 1502 aa19.35■□□□□ 0.69
NEDD4L-223ENST00000588516 KDM5CP41229 1560 aa19.34■□□□□ 0.69
NEDD4L-223ENST00000588516 FKBP8Q14318 412 aa19.34■□□□□ 0.69
NEDD4L-223ENST00000588516 ARHGEF5Q12774 1597 aa19.33■□□□□ 0.69
NEDD4L-223ENST00000588516 ZNF644Q9H582 1327 aaPredicted RBP19.33■□□□□ 0.69
NEDD4L-223ENST00000588516 TSPY4P0CV99 314 aa19.33■□□□□ 0.69
NEDD4L-223ENST00000588516 TSPY10P0CW01 314 aa19.33■□□□□ 0.69
NEDD4L-223ENST00000588516 PKD2Q13563 968 aa19.33■□□□□ 0.69
NEDD4L-223ENST00000588516 REREQ9P2R6 1566 aa19.33■□□□□ 0.68
NEDD4L-223ENST00000588516 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
NEDD4L-223ENST00000588516 ANKRD50Q9ULJ7 1429 aa19.32■□□□□ 0.68
NEDD4L-223ENST00000588516 AGLP35573 1532 aa19.32■□□□□ 0.68
NEDD4L-223ENST00000588516 KDM5DQ9BY66 1539 aa19.31■□□□□ 0.68
NEDD4L-223ENST00000588516 TOM1O60784 492 aa19.3■□□□□ 0.68
NEDD4L-223ENST00000588516 ABCA6Q8N139 1617 aa19.3■□□□□ 0.68
NEDD4L-223ENST00000588516 NPATQ14207 1427 aa19.29■□□□□ 0.68
NEDD4L-223ENST00000588516 SPATA31E1Q6ZUB1 1445 aa19.29■□□□□ 0.68
NEDD4L-223ENST00000588516 MLH3Q9UHC1 1453 aa19.29■□□□□ 0.68
NEDD4L-223ENST00000588516 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
NEDD4L-223ENST00000588516 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
NEDD4L-223ENST00000588516 ROCK2O75116 1388 aaKnown RBP19.27■□□□□ 0.68
NEDD4L-223ENST00000588516 ZMYM3Q14202 1370 aa19.27■□□□□ 0.68
NEDD4L-223ENST00000588516 MBD5Q9P267 1494 aa19.27■□□□□ 0.68
NEDD4L-223ENST00000588516 HNRNPUQ00839 825 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■■■□ 20.4
NEDD4L-223ENST00000588516 NBPF8Q3BBV2 869 aa19.24■□□□□ 0.67
NEDD4L-223ENST00000588516 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
NEDD4L-223ENST00000588516 PLA2R1Q13018 1463 aa19.23■□□□□ 0.67
NEDD4L-223ENST00000588516 TSHZ2Q9NRE2 1034 aa19.22■□□□□ 0.67
NEDD4L-223ENST00000588516 PLEKHH2Q8IVE3 1493 aa19.21■□□□□ 0.67
NEDD4L-223ENST00000588516 NUP155O75694 1391 aa19.2■□□□□ 0.66
NEDD4L-223ENST00000588516 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
NEDD4L-223ENST00000588516 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
NEDD4L-223ENST00000588516 PREX2Q70Z35 1606 aa19.19■□□□□ 0.66
NEDD4L-223ENST00000588516 RALGAPBQ86X10 1494 aa19.19■□□□□ 0.66
NEDD4L-223ENST00000588516 MROH2AA6NES4 1674 aa19.18■□□□□ 0.66
NEDD4L-223ENST00000588516 MAST1Q9Y2H9 1570 aa19.18■□□□□ 0.66
NEDD4L-223ENST00000588516 KTN1Q86UP2 1357 aaKnown RBP19.18■□□□□ 0.66
NEDD4L-223ENST00000588516 USP47Q96K76 1375 aa19.17■□□□□ 0.66
NEDD4L-223ENST00000588516 KIF15Q9NS87 1388 aa19.17■□□□□ 0.66
NEDD4L-223ENST00000588516 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
NEDD4L-223ENST00000588516 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
NEDD4L-223ENST00000588516 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
NEDD4L-223ENST00000588516 MYO3AQ8NEV4 1616 aa19.15■□□□□ 0.66
NEDD4L-223ENST00000588516 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
NEDD4L-223ENST00000588516 ABCC1P33527 1531 aa19.15■□□□□ 0.66
NEDD4L-223ENST00000588516 CDC42BPBQ9Y5S2 1711 aa19.15■□□□□ 0.66
NEDD4L-223ENST00000588516 ZNF142P52746 1687 aaPredicted RBP19.14■□□□□ 0.65
NEDD4L-223ENST00000588516 GGT6Q6P531 493 aa19.14■□□□□ 0.65
NEDD4L-223ENST00000588516 CPS1P31327 1500 aa19.13■□□□□ 0.65
NEDD4L-223ENST00000588516 SPAG9O60271 1321 aaKnown RBP19.11■□□□□ 0.65
NEDD4L-223ENST00000588516 C11orf95C9JLR9 678 aaPredicted RBP19.11■□□□□ 0.65
NEDD4L-223ENST00000588516 POTEDQ86YR6 584 aa19.11■□□□□ 0.65
NEDD4L-223ENST00000588516 CLTCQ00610 1675 aaKnown RBP19.11■□□□□ 0.65
NEDD4L-223ENST00000588516 BCANQ96GW7 911 aa19.1■□□□□ 0.65
NEDD4L-223ENST00000588516 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
NEDD4L-223ENST00000588516 PLXNC1O60486 1568 aa19.08■□□□□ 0.64
NEDD4L-223ENST00000588516 UNC13BO14795 1591 aa19.07■□□□□ 0.64
NEDD4L-223ENST00000588516 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
NEDD4L-223ENST00000588516 CARD11Q9BXL7 1154 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms